Gossypium hirsutum (upland cotton): 107898536
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Entry
107898536 CDS
T04793
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107898536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107898536
03051 Proteasome [BR:
ghi03051
]
107898536
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
107898536
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107898536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
Ubiquitin_2
UBA_7
UBA_NBR1_C
Dsc3_N
TBK1_ULD
Rad60-SLD_2
RPW8
Motif
Other DBs
NCBI-GeneID:
107898536
NCBI-ProteinID:
XP_016679510
UniProt:
A0A1U8IMZ4
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All DBs
Position
D04:55573619..55578591
Genome browser
AA seq
554 aa
AA seq
DB search
MGAGGDSSESRLGGNGGGEEGVTVNIRCSNGTKFTVRTNLESTVGSFKALLAQNCDIPAD
QQRLIYKGRILKDDQTLQSYGLQADHTIHMVRGFAPSSSTPPPSATTNVATDNTTPGVTR
GIGSNDGAGLGASLFPGLNPLGGGGGSGGFGLFGSGLPEFEQVQQQLTQNPNMMREIMNT
PAIQSLMNNPELMRSLIMSNPQMREIIDRNPELGHILNDPSILRQTLEAARNPELMREMM
RNTDRAMSNIEASPEGFNMLRRMYENVQEPFLNATTMGGNNGNSPATNPFAALLGNQGGS
QARSSPINTSTTGSETAQGQTSPNTNPLPNPWSNTAGGGVTQTNATTRPNPAGDARTPGV
GGMGGLGLPDLPPMLNGMPDASQLTQLLQNPAISQMMQSIISNPQYMNQIMNLNPQLRGM
FDMNPQLRDMMQNPEVLRQMFSPETMQQMLALQQSLLSLNRQQSTPDSAQTGGTTAAPGT
ANLDLLMNMFGGLGAGGLGVPNQPDVPPEELYAPQLSQLQEMGFYDTQENIRALRATAGN
VHAAVERLLGNSGQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgggaggcgattcaagtgagtcacgactcggtggaaatggaggaggtgaagaa
ggagtgacggttaatatacgctgctcgaacggtacgaaatttacggtgaggaccaatctc
gaatccaccgttggatctttcaaagctcttttggctcaaaattgcgatatcccagctgat
cagcaacggttgatttataaagggcgaatcctgaaagacgaccaaacccttcaaagttat
ggtttgcaagctgatcataccattcacatggttcgtggtttcgccccatcttcatctacg
cctcctccttcagctaccacaaatgttgcaactgataacactacgccaggggttactcgg
ggtattggttcgaatgatggtgctggtcttggggcatctttattccctggacttaatcca
cttggtggtggcggcggcagcggtggttttggtttgtttggatccggacttcctgaattt
gaacaagtacagcaacaactaactcaaaatcccaacatgatgagggaaataatgaatacg
ccagctattcaaagtttgatgaataacccggagttgatgcgtagtttgattatgagcaat
cctcaaatgcgtgagattattgataggaatccggagcttggacatatacttaatgatcct
agcattcttcgacagacattagaagctgcaagaaaccctgaactcatgcgtgaaatgatg
cgaaacaccgatagagctatgagtaatattgaagcttctcctgagggatttaacatgctt
aggcgcatgtatgaaaatgttcaagagccgtttttgaatgctacgactatgggtggaaat
aatggaaatagtccggctacaaacccatttgctgctttattgggcaatcaaggtggttct
caagctagaagttcacctattaacacttctacgactggttctgaaaccgcccaaggccaa
acttccccgaatacgaatcctctgcctaatccttggagcaacactgctggtggtggggtt
acccagaccaatgctactacaaggccaaatcctgctggggatgccaggacaccaggtgtt
ggtggtatgggaggccttggacttccggatctgccacccatgttgaatggaatgccagat
gcttctcagttgacccagttattgcaaaacccggcaatttctcagatgatgcagagcata
atatctaatccccaatatatgaatcagatcatgaatctcaacccccaactacgtggcatg
tttgatatgaatcctcaattgagagatatgatgcaaaaccctgaagtactacgtcagatg
ttttcccccgagacaatgcagcaaatgctagctttacagcaatcgcttctgtctctcaat
cggcagcaatcaaccccggactcagcacagactggcggtactacagcggcaccgggaact
gccaatctagacttgttgatgaatatgtttggcggtctgggcgctggtggccttggtgtc
cccaaccaacccgatgttccccctgaagaactttacgctccacaattatcacaactccaa
gaaatgggtttctacgatacacaagagaatatcagagcattacgagctactgccggaaac
gtccatgctgcagtcgagagacttctgggaaattccgggcagtag
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integrated database retrieval system
