Gossypium hirsutum (upland cotton): 107898576
Help
Entry
107898576 CDS
T04793
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107898576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107898576
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107898576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
DUF5088
Motif
Other DBs
NCBI-GeneID:
107898576
NCBI-ProteinID:
XP_016679570
UniProt:
A0A1U8IN59
LinkDB
All DBs
Position
D04:55175385..55178555
Genome browser
AA seq
321 aa
AA seq
DB search
MFFDGYGYHGTSFEQSYRCYPASFIEKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR
NDAAERVSHCGVLEFIAEEGMIYMPYWMMENLVLQEGDIVRVKNVTLPKGTYVKLQPHTK
DFLDISNPKAILETTLRNYSCLTTGDSIMVAYNNKKYYIDIIETKPSNAISIIETDCEVD
FAPPLDYKEPERPAAPTSSNRASSQVEEAPAEAEPKFSAFTGTGRRLDGKPLKQQSPPAS
SSGSKDKGPAISNGNNTRPYSGSSSQATAGQAQGKLIFGSHVNRSKDTKQESGKETRSEQ
PEKKEEPKFQPFTGKKYSLKG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgatgggtacggttatcatgggacatcttttgagcagagttaccgatgttac
ccggcatctttcatcgagaagccgcaaatcgaaagtggtgataaaattataatgcctcca
tcagcccttgatcgcttagcatctctgcatattgattatccaatgttatttgagcttcgg
aacgatgctgccgagcgtgtctctcattgtggagtactggagtttattgcagaagaaggc
atgatctatatgccatattggatgatggagaatttggtcctacaagagggagatatcgtg
agggtgaaaaatgtaactcttccaaagggaacctatgttaaattacaaccccacacgaag
gactttttggatatctcaaacccaaaagctatcttggagacaacactgaggaattattcc
tgtttaaccaccggggatagtattatggtggcatataataataaaaagtattacatagat
atcattgagacgaagccatccaatgcaataagcatcatcgagacagattgtgaggtggat
tttgctcctcccctggattacaaggagccagaacggcctgctgcaccaacttcttcgaac
agagcatcgtctcaagttgaagaagctcctgctgaggctgaaccaaagtttagcgccttt
actggtacgggaagacgcttggatgggaagcctctgaagcagcagtctccaccagcttct
tcatccgggtcaaaagacaaaggacctgctatttctaatgggaataatacccgaccttat
tcgggatcaagttcacaagctaccgcaggccaggctcaagggaaactcatattcggatca
catgtcaaccgttctaaggatacaaaacaggaatccggaaaagagactagatcggagcag
cctgaaaagaaggaagagccaaagttccagccatttacagggaagaaatactctttaaag
ggttga
DBGET
integrated database retrieval system
