Gossypium hirsutum (upland cotton): 107898631
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Entry
107898631 CDS
T04793
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00730
Thiamine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107898631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107898631
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
107898631
Ribosome biogenesis [BR:
ghi03009
]
Prokaryotic type
GTPases
107898631
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
ABC_tran
MMR_HSR1
AAA_29
nSTAND1
AAA_21
AAA_23
AAA_16
AAA_22
Guanylate_kin
Roc
Motif
Other DBs
NCBI-GeneID:
107898631
NCBI-ProteinID:
XP_016679627
UniProt:
A0A1U8INC1
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Position
D04:57008054..57012552
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AA seq
481 aa
AA seq
DB search
MPITSFSLFRSRLPAITTVLRRHSPPYRHLFILSAKQTPSNSRQNVSKKPQPNKNLLKAK
HTFKDYSSLAPVLAPNETPSLSDSQAVGAVAAAQANFMRVIVQREPEDGMKTGLELLCVV
RAVLKKIKRRVLVGDKVVVGSIDWVERRGVIENVFQRSSEIVDPPVANVDRLLVLFSMEQ
PPVEPFMLTRFLVEAESYRIPLTLALNKTELVDEETLFAWKNRLRSWGYEPVFCSVETKN
GLDSLAFYLRDQTTVIVGPSGVGKSSLINVLRSDHRTPDSLEGDNLFDPISGSKWFEDQR
VGEVSTRSGRGKHTTRHVSLLPLLGGGYVADTPGFNQPSLLKVTKQSLAQAFPEIRKMLK
DSEPAKCSFNDCLHLGEPGCIVKGDWERYPYYFQLLDEIRIREEFQLRTFGTKREGDVRY
KVGDMGVQQAEPRLEPKKHRRQSRKRINQSLLDELDELEDDDDSLDLENDPIVRAIENEN
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcacttctttttcactgttccgcagccgtttacccgccataaccaccgttctc
cgccgtcactcaccaccctaccgccacctctttatcctctccgccaaacagaccccttct
aattcaagacaaaacgtatccaagaaaccccaacccaacaagaacctcctcaaggctaaa
cacaccttcaaagattactcctctttagctcccgtccttgcccctaatgaaactccatct
ctttccgattctcaagccgtcggcgccgttgccgctgctcaagccaatttcatgcgggtc
atagttcaacgggaaccggaggatggtatgaaaactgggttggagttgctttgtgtggtg
agggcagttttgaagaagataaagaggagggttttggttggggataaggtggtggttggt
tcgattgattgggtggaacggcgtggggttattgagaatgtgtttcaacggagttctgag
attgttgatccgccggttgctaatgttgatcgcttgctcgtgcttttctctatggaacag
ccgccggtggagccgtttatgcttacgagattcttggttgaagctgagtcttataggatt
ccactcacgcttgctttgaacaaaacggaactcgttgatgaagagactcttttcgcatgg
aagaataggctgcgaagctggggatatgaaccggtcttttgcagtgttgagaccaaaaac
ggacttgattctcttgcattttacttgagggatcaaacaactgtaattgttggtcctagt
ggggttgggaaatcaagccttatcaatgttctccgaagtgatcaccgcactcctgattcc
cttgaaggagataatttgtttgatcctatttcaggcagcaagtggtttgaagatcagagg
gttggggaggtctcaacaagaagtggcagagggaaacacactacgcgacatgtttcgttg
cttccactattgggagggggctatgttgccgatactccggggtttaatcaacctagcttg
ttgaaagtgacaaagcaatctcttgcacaagctttccccgagattcggaaaatgctaaaa
gacagtgaacctgcaaaatgctcattcaatgattgcttacatcttggtgaacctgggtgc
attgtgaaaggggattgggaaagatatccatactatttccaacttctcgatgagatccgg
atcagagaggaatttcagttgaggacattcgggaccaagagagaaggtgatgtcaggtac
aaagtgggagatatgggtgttcagcaagctgaacctcgattggaaccgaagaaacatcga
aggcaatcgcggaaaaggattaaccagtcgttattagatgaattagatgaacttgaggat
gatgatgatagcttagacttagaaaatgacccaattgttagagcaatagagaatgaaaac
cagtag
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