Gossypium hirsutum (upland cotton): 107898641
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Entry
107898641 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107898641
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107898641
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107898641
03036 Chromosome and associated proteins [BR:
ghi03036
]
107898641
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107898641
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107898641
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107898641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
107898641
NCBI-ProteinID:
XP_040946981
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All DBs
Position
D04:complement(56915093..56921157)
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AA seq
651 aa
AA seq
DB search
MLKQILSKLPRKSSKSANNREHGGHHNAYYSSVSGGGSRTSDFGTGKSANLSVSSFAVSS
PTTDVGWKSADLKQNGNHMLSSYEAMPAFKDVPASERQNLFVKKLNLCCVIFDFTDPTKN
LKEKEIKRQTLLELVEYVTSANGKFSDVVLQEIVKMVSANLFRSFNPQPRENKVIEGVDL
EEEEPSMDPAWPHLQIVYEFLLRFIASPETDAKLAKRYVDQPFILKLLDLFDSEDPRERE
YLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEILGSIINGFALPLK
EEHKVFLVRALIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITNSSK
EVMFLNELEEVLEATQPPEFQRCMMPLFRQIARCLNSLHFQVAERALFLWNNDHIENLII
QNRKVILPIIFPALEKNARNHWNQAVHSLTLNVRKIFNDLDPELFKECLLKFQEDESKED
ETEAKRENTWKRLEELAEKKAFHSEATVETSESMANGSSDRTVLILWEKGETSRWLVRRT
RESKLFLAFATICGVVSGVIGYGVMQLTSSRNPQLVAQRRQNACPESFMMGKVNQERLAE
YLGELQWKDDPSDRSAAALRGETLTRTPYQRIQPVPKQNAEKKKNNSNDKA
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacagattctaagtaagcttcctcggaaatcgtcaaaatctgctaataatcgc
gaacacggtggacaccataatgcttattattctagtgtttcgggtggtggttcaaggacc
agtgatttcgggactggtaagtctgcaaatttgagtgtttcatctttcgccgtatctagt
cctacgacagatgttggatggaaaagtgcggatttaaagcagaatgggaaccatatgttg
tcttcttacgaagcaatgcctgctttcaaagatgtcccggcttctgagagacagaactta
tttgtaaagaagcttaacttgtgttgcgtcatatttgatttcaccgatccaacaaagaac
ctcaaagaaaaagagataaaacggcagacattattagagcttgtagagtatgtgacttcc
gcgaatgggaaattttcagatgttgtgttacaagaaattgttaaaatggtttcggcgaac
ttgtttaggagctttaatccgcaaccacgtgagaataaagtcatagaaggtgtcgattta
gaagaggaagaaccttcaatggatcctgcttggccacacttgcaaattgtttatgagttt
cttttgaggtttatagcttcacccgagaccgatgcaaaattagccaaaagatatgtcgat
caacccttcatcttgaaattacttgacttgtttgattctgaagatcctagagaaagagaa
tatttgaaaacaattcttcatcgcatctacggcaaattcatggttcatcgaccattcatt
cggaaagctataaacaacatttttttccgttttatttttgagaccgagaaacacaacgga
attgctgaacttttggaaattttgggcagtattattaatgggtttgcgttgccactaaaa
gaagaacataaagtattccttgttcgggcgttgattccgttgcataaaccgaaatgttta
gccatgtatcatcagcagttatcttactgtattacgcagtttgtcgagaaagactgcaag
cttgccgatactgttattagggggttattaaagtactggcctatcactaatagttcgaag
gaagtcatgttcctaaatgaattggaagaagttttagaagcaactcagccacccgagttt
caacgctgcatgatgccattatttcgccaaattgctcgatgtttgaacagtctgcacttt
caggtagccgagcgggctttgtttttgtggaacaacgatcacatcgagaacttaatcatt
caaaaccgcaaagtcatacttccgatcattttcccggccttggagaaaaacgcgagaaat
cactggaaccaagccgtacatagcttgacactaaacgtccgcaaaatcttcaacgatctt
gacccggagctgttcaaggaatgcttactcaagttccaggaagacgaatcgaaagaagac
gagaccgaagcaaaacgggaaaatacatggaaacgcttggaagaacttgcggaaaagaaa
gctttccatagtgaagcaacggtcgagaccagtgaatcgatggctaatggctcctcggac
cgaacagtattgatactgtgggaaaaaggtgagacttcgcggtggttagtgaggaggaca
agggaatcgaaactgttcttggcgtttgccaccatttgtggcgtcgtttcgggtgtcatt
ggctacggtgtcatgcaacttaccagctcccgcaaccctcagttggtggcccagcggcgc
caaaacgcctgccccgaatccttcatgatggggaaagtgaaccaagagcgattagcggaa
taccttggggagctccagtggaaagatgatccgagtgatcgaagtgcagctgctttgagg
ggggagacattgactaggactccttatcagagaattcagcctgttccaaagcaaaacgcc
gaaaagaagaagaacaacagcaacgacaaggcttag
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