Gossypium hirsutum (upland cotton): 107898681
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Entry
107898681 CDS
T04793
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670 isoform X1
KO
K14945
protein quaking
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107898681
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107898681
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
107898681
NCBI-ProteinID:
XP_016679689
UniProt:
A0A1U8IUU5
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All DBs
Position
D04:56533408..56536019
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AA seq
300 aa
AA seq
DB search
MMGERISPGSYFQYPPPGFPSVSPHRPSSITTDRERYLAELFTEKEKLGPFTQVLPQCTG
LLNQEIRRVSGFSPSLLDHERFEHDSPIRSFGHHPNGRQMDLEGWSIMQTEENGHLQRVA
PVQAASMGWPGLPGAPTTPLVKKVVRLNVPVDQYPSYNFVGRILGPRGNSLKRVEAVTEC
RVYIRGKGSVKDSVKEEKLKDKPGFEHLNEPLHVLVEAELPEDVINSRLDYAVAILENLL
KPVDESLDNYKKQQLRELALLNGTLREESPRMSPTMSPSMSPFNGTGMKRANYFSQKPLL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagaaagaatctcaccagggagttattttcaataccctccacctggtttccct
tcagtttctcctcatagaccttcatctattactacagatcgtgaaagatacttagctgaa
ttattcacagagaaagagaagttgggacctttcacacaagttcttcctcaatgcaccggg
cttcttaatcaagagatcagaagggtctcaggttttagtccaagtttattagatcatgag
agatttgagcatgatagtcctattaggtcatttggtcatcatcccaatggaagacaaatg
gatttggaaggatggtccataatgcaaacagaggaaaatgggcatctgcaacgagttgct
ccggttcaagctgcatcaatgggttggcctggtttgccaggagctccaacaacaccgctt
gtaaagaaagttgttagactcaatgtacctgtggatcaatatcctagttataattttgtt
ggtcgaatattgggaccacgaggaaactccctaaagagagttgaagctgtgactgagtgt
agggtgtacataagaggcaaaggttctgtcaaggattctgttaaggaagagaaactaaaa
gataaacctggattcgaacaccttaatgagccgttgcatgtgttggtggaggctgaactt
cccgaagatgtgataaattctcgtttggactacgctgttgccatactagaaaatcttctg
aaacctgtggatgaatccttggataactataagaaacaacagcttagggagttggcttta
ctaaatggtacattaagggaagagagtccgagaatgagcccgactatgagccctagtatg
tcaccctttaacggtactggaatgaaacgagccaattattttagccaaaaacctctacta
tag
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