Gossypium hirsutum (upland cotton): 107898800
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Entry
107898800 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107898800
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107898800
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107898800
03036 Chromosome and associated proteins [BR:
ghi03036
]
107898800
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107898800
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107898800
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107898800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
107898800
NCBI-ProteinID:
XP_040961240
UniProt:
A0A1U8INY9
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All DBs
Position
D11:complement(72365345..72368530)
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AA seq
476 aa
AA seq
DB search
MFKNFKKGGHRKPSKSSDSSADASSKGIGAPGPGPTSKSGVGAPAQNTVEPVVPPPMTHV
EPLPLLGKSPAAERQNLFMRKLQVCCFRFDFTDTLKSAREKEIKRQTLLELVDFIQSGTG
KVAEACLGEMIKMVGVNIFRCLPPASHESSGTEVVDPDEEENYSEPSWQHLQIVYELLLR
YVVSSDTDTKVAKRYIDHTFVLKLLDLFDTEDFREREYLKMVLHRIYGKFMVHRPLIRKS
ISNIFYRFIYETERHSGVGELLEILGSIINGFSMPMREEHKLFLMRALIPLHKTKQVGNY
HQQLSYCIVQFVDKDYKLADMVIRGLLKYWPLVNCQKEVLFLGELEEVLEETQSAEFQRC
MVPLFRKIAGCLNSPHFQVAERALFFWNSEHIVSLIAENRQVILPIIFEALEKNIQSHWN
TEVHGLTVNVRKMFLEMDAELVDECQKQLAEKQAKAREVAEQREMTWKKLEDAARK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaattttaagaaaggagggcatcggaagccttccaaatcatcggactcatca
gcggatgcatcttcaaagggaatcggtgcacccgggccgggtccgacatcaaaatccggt
gtcggtgcaccagctcagaacaccgtcgaacctgtcgttccaccgccgatgacccacgtg
gaacccttgcctttactcggaaaatcccccgctgcggagagacagaacctgttcatgagg
aaattacaggtttgttgcttccgattcgatttcacggacaccttgaaatcagcccgagaa
aaagaaatcaagcggcaaacgctgctagaactcgtcgatttcatccaatccggtacaggc
aaagtcgcggaggcttgcctcggagagatgatcaagatggtcggagtcaacatcttccga
tgcctcccgccggcgtctcacgagagctcggggacggaagtcgtggatcccgacgaagag
gaaaactattccgaaccctcgtggcaacatttacagatcgtttacgagcttctcttgagg
tacgtcgtttcatctgatacggacactaaggttgccaagcgatacattgatcataccttt
gttttaaagctgcttgatttgtttgatactgaagatttcagggaaagagagtacttaaaa
atggttcttcataggatttatggaaaattcatggtgcatcgtcctttaattaggaaatcc
ataagcaacatattctataggtttatctatgaaaccgagagacatagcggtgtgggcgag
cttttagagattctaggaagtattatcaatggcttctcaatgcctatgagagaagaacat
aaattgttccttatgagagcattgatccctttgcataagactaaacaggtcggtaattat
catcagcaattgtcttattgtatagttcagtttgttgacaaggattataagctggctgat
atggttattagagggctgttgaagtattggccattggttaattgtcaaaaggaagttctc
ttcctcggggaactcgaggaagtgctcgaagaaacacagtccgcagagttccaacgatgt
atggttcctcttttccgaaagattgcaggttgccttaatagccctcattttcaggttgca
gaaagagccctcttcttctggaatagcgagcacattgtgagcttaatcgctgagaaccga
caggtaatattaccaatcatctttgaggcattggagaagaatatccaaagtcattggaac
actgaagttcatgggttgaccgtgaacgtacggaaaatgttcttggaaatggacgctgag
ttagtcgatgagtgccagaaacagcttgcagagaaacaagccaaagccagagaggtagca
gagcaacgagaaatgacatggaagaaactcgaagatgcggcacgcaagtag
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