Gossypium hirsutum (upland cotton): 107898847
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Entry
107898847 CDS
T04793
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107898847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107898847
Enzymes [BR:
ghi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
107898847
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
107898847
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
107898847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
DNA_ligase_A_M
PTP-NADK
Y_phosphatase2
PTP-SAK
Y_phosphatase
DSPn
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
107898847
NCBI-ProteinID:
XP_016679897
UniProt:
A0A1U8IVH8
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All DBs
Position
D11:72700239..72707539
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AA seq
679 aa
AA seq
DB search
MIAGMDLNASPVPEDDEEIYERHIEHYSAQEEHVESAVEISRREREERRKRLRRDRSDDR
PVHVSQPPVYDHFYQNRNPRSYDKSRIPPGWLDCPSVGQEIGCIIPSKVPLGESYNDCVP
PGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYQTTDLKREGIKHVKIQCKGRDSVPEN
VAVNTFVYEVSQFLLRQKSKKYILVHCTHGHNRTGYMIIHYLMRSQSMSVTQAIKIFNEA
RPPGIYKPDYIDALYAFYHERRPEMVVCPSTPEWKRSSDLDLNGDAVADDDDDDGGGGPA
ALPENHETDAVLTNDDILGDEIPRDQLESMRSFCYQTLKLNLGARGHAQFPGSHPVSLNR
DNLQLLRQRYYYATWKADGTRYMMLITVDGCYLIDRSFNFRRVQMRFPARHPNEGIGERT
HHFTLLDGEMVIDTLPDSQKQERRYLIYDMMAINTVSIVERPFYERWKMLEKEVIEPRNY
ERQNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKVLKEFIPRLSHEADGLIFQGWDDPY
VPRTHEGLLKWKYARLNSVDFLFEISSDDRPQLYLFERGKRKLMDRDTVEFRDVSDPPSS
FSGKIIECSWDPDQQVWVYMRIRTDKSTPNDFNTFKKVMRSIKDNITDEILLNEINEIIR
LPMYADRIRMDSKASARRK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgattgctggtatggacttaaatgcttcaccagtacctgaagatgatgaagagatatat
gaaagacatattgaacattactctgcacaagaagaacatgtagaatctgcagttgaaatt
tcgcggcgggaacgtgaagaaagacggaagagattgagaagagaccgatcggatgaccgg
ccagtccatgtctctcagcctcctgtatatgatcacttctatcaaaataggaatcccagg
tcttatgataaaagcaggatccctcctggttggctggattgtccttcagttggtcaggaa
ataggctgtattattccttctaaggttccacttggtgaatcttataatgactgtgttcct
cctggtaaaagatactcttttaagcaagtgattcatcagcaaagagttctaggaagaaag
cttggtttggtgattgatttgacgaacacatctcgttactatcaaactacagacctgaag
agagaaggcattaagcatgtaaagattcaatgcaaaggaagagattctgtacctgagaat
gtggctgtaaatacctttgtttacgaggtgtcgcaattcctcctacgtcaaaaatcaaag
aaatatattcttgttcattgtacccatgggcataaccgtactggatacatgattattcac
tatcttatgcgatcacaatcaatgtctgttactcaggcgataaaaattttcaatgaggca
cgccctccaggaatctacaaacctgactacattgatgctctgtatgcattttatcatgaa
agaaggcctgaaatggtcgtctgcccttcaactcctgagtggaagaggtcttctgacctt
gatctcaatggtgatgcagttgcagatgacgacgatgatgatggaggtggaggtccagct
gcattacctgagaatcatgaaacagatgcagtgttgacaaatgatgacattttgggagat
gaaatacctcgtgaccaactggaatcaatgcggtcattctgctaccagacattgaagtta
aatcttggagctagaggacatgcacaatttccgggatcgcatccagtttcacttaacagg
gacaatctacaacttttaaggcaacgttattattatgctacttggaaagcggatggaaca
cgatatatgatgttaataactgttgatggttgttacttaattgataggagttttaatttc
cgaagggttcagatgaggttcccagccagacacccaaatgaaggtataggggagagaact
catcatttcacattgcttgatggtgaaatggtaatagacaccttgccagactcgcaaaag
caagagagaagatatctcatttatgatatgatggcaattaacactgtttctattgtagag
cggcccttctatgaacgatggaaaatgctggaaaaagaagtgattgagcctcgaaattat
gaacggcagaacatttaccagagcaggaatccttattatcgatatgaccttgaacccttc
agggtgcggaggaaggatttttggttgctatccactgtaaataaggttttgaaggaattt
atccctaggctctctcatgaggcagatggtcttatttttcagggttgggatgatccgtat
gtacctcgcactcatgaaggtcttctgaaatggaaatatgctcggctgaactctgttgac
tttctatttgagattagcagtgatgatcgtccacaactttatctctttgaacggggaaaa
aggaagttgatggatagggatacagttgaattcagagatgtttcagatcctccatcttca
ttctctgggaagattatcgagtgttcttgggatcctgatcagcaggtgtgggtctatatg
cggatcaggacagataagtcgactccaaacgatttcaatactttcaagaaggtaatgcga
agtataaaggataatatcacagacgaaatcttattaaatgagattaatgagattattcgg
ttgcccatgtatgccgatagaataaggatggacagcaaggcttcagcacgacgcaagtga
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