KEGG   Gossypium hirsutum (upland cotton): 107898950
Entry
107898950         CDS       T04793                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107898950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107898950
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107898950
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107898950
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 Prok-RING_4 zf-ANAPC11 zf-rbx1 PTR3_N zf-RING_6 FYVE Baculo_IE-1 TRAF3_RING zf-LITAF-like Rtf2
Other DBs
NCBI-GeneID: 107898950
NCBI-ProteinID: XP_016680017
UniProt: A0A1U8IUC7
LinkDB
Position
D04:51888827..51890969
AA seq 238 aa
MIIEQYMESKICLQEWMDSPGSVSVLDDNPSRSFDCNICLDSVQDPVVTFCGHLFCWPCI
YKWLSTGNQDQKQHQCPVCKAEVSDTTLIPLYGRGSVTSKESRPKASQFGMVIPKRPPGP
TNGVGTIQGSPNTTDHHGYSYQPQAYFPPLDGYPDSPMFSPGGTPINVPDPVIRMFGEMV
YTRVFGNSVTNFYTYPNSYNLTRSTSPRIRRQVMQADKSLGRISFFLFCCIFLCLLLF
NT seq 717 nt   +upstreamnt  +downstreamnt
atgatcattgagcagtacatggaaagtaagatttgcttgcaggagtggatggattcacca
ggttcggtctcggttttggatgataacccgtcgagaagcttcgactgtaacatctgcctc
gactcagtgcaggatccggtggtcacattttgtggtcacctgttttgttggccttgcatc
tataaatggctttccactggaaaccaagaccagaaacaacaccaatgtcctgtatgcaaa
gctgaagtttcggataccacactgattccactttacggcaggggcagcgtaacgagcaag
gagtcgagaccaaaggcttcgcaattcggcatggtcataccgaagagacctcctggtcca
accaatggcgtcggcacgatacaaggatccccaaatactaccgatcatcatggatattca
tatcaacctcaagcctacttccctccactggatggttatccagattcaccgatgtttagt
cccggtgggacacctataaacgtacctgatccagtcatccgaatgttcggtgaaatggta
tacacgagagtattcgggaactcagttaccaacttctatacatacccaaattcgtacaat
ctaacaaggagtactagtcctaggattagaaggcaggtaatgcaagccgataaatcgctc
ggcagaataagttttttcctcttctgttgcatattcctttgccttcttttgttctga

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