Gossypium hirsutum (upland cotton): 107898977
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Entry
107898977 CDS
T04793
Name
(RefSeq) transcription activator GLK1 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107898977
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
107898977
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
EBP50_C
CDC45
CCD97-like_C
Nop14
Glypican
UBM
Motif
Other DBs
NCBI-GeneID:
107898977
NCBI-ProteinID:
XP_016680044
UniProt:
A0A1U8IVX1
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Position
A04:81405047..81407835
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AA seq
439 aa
AA seq
DB search
MLAVSPLRNARNDENKGKMESFSIISSEEFPDFAEGNLLESIDFDDLIIGIDEGDMLPDL
EMDPEILADLPTSRCDVEESMNTSVEKTDEDSSQRKEEEEEEDKISGSGSGSSSSKGEEI
LSKREEPNAVNKTPSKYAVKGRKSSAAQAKNNNQGKRKTKKVDWTPELHRRFVQAVEQLG
VDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWTQRRQMYGGAATS
AGGGKRDINPWLAPTMGFPPMSPMHHHHFRPLHVWGHPTMDQSLVHLWPKHPAHTTSQPP
QRPQSTWGPPPANPSFWHHHHQRVSNGLTPGTPCFPQPIAPTINNHSSFGSILPVCISTR
FRAAPVPGIPPHHHGTGGQSGPHPLIDFHPSKESIDAAIGDVLSKPWLPLPLGLKPPSTD
SVLGELQRQGVPKIPPSCA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtgtcacctttgaggaacgcaaggaatgacgagaacaaaggaaagatggag
agtttcagtattattagctctgaagagttcccagacttcgccgagggaaatttacttgag
agtattgatttcgatgatcttatcatcggcatcgatgaaggcgatatgttgccggatttg
gagatggaccctgaaattcttgcagatttacccaccagtagatgtgatgttgaggaatca
atgaacacttcagtagaaaaaactgacgaggatagtagccaaaggaaagaggaggaggaa
gaagaagataaaatttcgggttcggggtcaggttcgagctcaagcaaaggcgaggagatt
ctcagcaaaagagaggaacctaatgcagttaataaaacgccttctaaatatgctgttaag
ggaagaaaatcttcagcagcacaagcaaagaataacaatcaaggcaagcgaaaaacgaag
aaggtggattggacgccagagttgcacaggaggttcgttcaagcagtggagcagctcggg
gtggataaggcggtgccttcaagaattttagagcttatgggaatcgattgtctcactcgc
cataacattgccagtcatcttcaaaaatatagatctcatcggaagcatttgctagcccgt
gaggcggaggccgcaaattggacccaaaggagacaaatgtacggtggtgctgccacctcc
gctggtggaggcaagagagatataaatccttggcttgcacctactatgggtttcccgccg
atgtcacccatgcaccaccaccactttaggcctttgcatgtatggggtcatcccaccatg
gatcaatccctcgtgcacttatggcctaaacatccagctcacacaacatcccaaccaccg
cagcgaccacagtctacatggggacctccaccagctaacccctcgttttggcatcaccac
caccaacgtgtatcaaatggactaaccccaggaacaccttgctttccacaaccaatagca
ccaacgataaacaatcactccagttttggcagcatcttacctgtttgtatctcaactaga
ttccgtgcagcaccggtcccgggcattcctccccaccaccacggtactggcggacaatca
ggaccccaccctctcattgacttccatccgtcgaaagagagcatagatgcagctatagga
gacgttttgtcaaagccatggctgccacttcctcttggactaaagccgccatctacagat
agcgtattaggagagttgcaacgtcaaggagtgcccaagataccaccctcctgtgcttga
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