Gossypium hirsutum (upland cotton): 107899095
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Entry
107899095 CDS
T04793
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107899095
09124 Replication and repair
03420 Nucleotide excision repair
107899095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107899095
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107899095
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107899095
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
107899095
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107899095
TCR (transcription coupled repair) factors
Cul4-CSA complex
107899095
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107899095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
107899095
NCBI-ProteinID:
XP_016680198
UniProt:
A0A1U8IUV2
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All DBs
Position
A06:108697767..108705440
Genome browser
AA seq
814 aa
AA seq
DB search
MSLPPTKRSITNATASSSSSPHFQPPMKKAKSQAVACSLDPNRNGLHHHHNNQDDNNVLF
DPSSMPLHDDSKSADARTPAAANLSRKKATPPQPAKKLVIKLVKAKPTLPTNFEVETWAT
LKSAIIAIFLKRPDSCDLEKLYQAVNDLCLHKMGGSLYQRIEKECEEHISSALRSLVGQS
PDLVVFLSLVEKCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKHLSMA
PEVEHKTVTGLLRMIEGERLGEAVDRTLLNHLLKMFTALGIYSESFEKPFLECTSEFYAA
EGMKYMQQSDVPDYLKHVEMRLHEEHERCVLYLDALTRKPLIATAEKQLLERHIPAILDK
GFVMLMDGRRIEDLQRMYSLFSRVNALESLRQAISSYIRRTGQVIVMDEEKDKDMVPSLL
EFKASLDSIWEESFSKNEAFGNTIKDSFEHLINLRQNRPAELIAKFLDEKLRSGNKGTSE
EELEGTLDKALVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQ
FTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPH
ELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDA
QKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGRDVEDNDSFIFNDGFTAPLY
RIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKF
PIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcccccccaccaaacgctctataaccaacgccactgcttcttcttcttcctcg
cctcatttccaacctccaatgaagaaagccaagtcccaagccgttgcttgctccctcgac
ccaaacagaaacggcctccatcaccaccataacaaccaagacgataacaacgtccttttt
gacccttcatctatgcccctccacgatgattccaagtccgccgatgctcgtactcccgcc
gccgctaatttgtctcgcaaaaaggctacccctcctcaacctgccaaaaagcttgtcatc
aaactcgttaaagccaaaccaacattgcctacgaattttgaggtggagacatgggcaacg
ctgaagtcagccattattgccatatttttgaagcgaccagattcttgcgacttggagaag
ctttaccaggctgtcaatgatctttgcctgcacaagatggggggaagcctttatcaacgc
attgaaaaagagtgtgaagaacatatatcttcagcactaagatctttggttgggcaaagc
ccagatttggttgttttcttatcacttgttgagaaatgttggcaagatctttgtgatcag
atgttaatgattcgtggtatagccttgtatctagacagaacatatgttaaacaaaccccg
aatgtacgttcattgtgggatatgggcttgcagctcttccgtaaacatctttccatggct
cctgaagttgagcacaaaactgtcacgggtcttttgagaatgattgagggtgagaggtta
ggtgaagcggttgataggactctccttaaccatcttttgaagatgtttactgctttaggt
atttactctgaaagctttgagaagccattcctggagtgcacgtctgagttttatgcagcc
gaaggaatgaaatacatgcagcaatctgatgttccagattacctgaagcatgtagagatg
aggttgcatgaagaacacgaaagatgtgttctctacctggatgctcttacaagaaagcca
cttatagcaacagcagaaaagcaactgcttgaacggcatatacctgctattcttgataag
ggatttgtgatgctgatggatggacgtcgtattgaggaccttcagagaatgtactcactg
ttttcaagggtcaatgctcttgaatcactccggcaggcaataagttcatatattcggaga
actgggcaagtcattgtcatggatgaagagaaagacaaggacatggtgccttccttgtta
gaattcaaagcttcgcttgactcaatatgggaagaaagcttttccaagaatgaggcattt
ggcaacaccatcaaggattcctttgagcatctaattaatcttcgtcagaaccgacctgct
gagctgattgcaaagttcctggatgaaaagcttcgttctggtaataagggtacttcggaa
gaggaattagagggtacacttgataaagctttggttttatttaggttcatccagggcaaa
gatgtctttgaagcattttataagaaagatcttgcaaaaaggctgcttctaggaaagagt
gcttctattgacgcagagaaatctatgattaccaagctgaagactgagtgtggcagtcaa
tttacaaacaaacttgaaggaatgttcaaggatattgaactatcaaaggagataaatgaa
tcattcaagcagtcatcccaggccagaacaaagcttccatctggaattgagatgagtgtt
catgtcttgacaaccgggtactggccgacatatccacccatggatgttaggcttcctcat
gaacttaatgtctatcaggacatctttaaggagttctacttgagtaagtacagtgggagg
cgcctaatgtggcaaaattcattaggtcattgtgtcttgaaagctgattttccaaaaggt
aaaaaggagctggcagtttccttattccagactgtagttctgatgttgttcaacgatgcc
caaaagcttagctttcaagacattaaggactctactggcatagaggacaaggaattgaga
aggaccttgcagtcccttgcatgtgggaaagttagagtcctacaaaagttgccaaaaggg
agggatgtagaagataatgactcattcattttcaatgatggatttactgctcctctctat
cgtataaaggtaaatgctatccagatgaaagagacagtggaggagaacacaagcactact
gaaagagtatttcaagaccgtcaatatcaggttgatgctgctattgttcggataatgaag
accaggaaggtgttgagtcacactcttctgataactgaactcttccaacagctcaagttt
cccataaaaccggctgatttgaagaaaaggatcgaatctctcattgacagggagtacctg
gagcgggacaagaacaacccacaaatatacaattacttggcatag
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