KEGG   Gossypium hirsutum (upland cotton): 107899247
Entry
107899247         CDS       T04793                                 
Name
(RefSeq) signal recognition particle 54 kDa protein, chloroplastic
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03060  Protein export
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    107899247
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ghi02044]
    107899247
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     107899247
Secretion system [BR:ghi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   107899247
  Eukaryotic Sec-SRP protein
   107899247
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 CLP1_P AAA_17 APS_kinase AAA_16 cobW NTPase_1 AAA_30 ParA nSTAND3 AAA_18 AAA_31 ArsA_ATPase ResIII Thymidylate_kin KAP_NTPase AAA_24 AAA_33 NPHP3_N 6PF2K AAA AAA_19 ATP_bind_1 AAA_26 TctA KTI12 AAA_14 SLFN-g3_helicase SRPRB NB-ARC BRCC36_C Vps23_core
Other DBs
NCBI-GeneID: 107899247
NCBI-ProteinID: XP_016680397
UniProt: A0A1U8IQM2
LinkDB
Position
D04:35338402..35344537
AA seq 568 aa
MEAMQISATASRHFSATLGPFSTNRSPTKPTKLATSWASSASTNLASLSSRNLFTREIWG
WVNSKTATSRREMRGVVRAEMFGQLTSGLEAAWTKLKGEEVLTKENIVEPMRDIRRALLE
ADVSLPVVRRFVQAVSDQAVGVGLIRGVKPDQQLVKIVNDELVKLMGGEVSELVFSKSGP
TVILLAGLQGVGKTTVCAKLANYLKKQGKSSMLIAGDVYRPAAIDQLVILGEQVGVPVYT
AGTEVKPSEIAKQGLEEAKKKKIDVVIMDTAGRLQIDKGMMDELKEVKKVLNPTEVLLVV
DAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMED
LEPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEELQKKIMSAKFDFNDFLKQTRAVA
RMGSMTRVIGMIPGMGKVTPAQVREAEKNLKLMEAMIEAMTPEEREKPELLAESPDRRRR
IAKDSGKTEQQVSQLVAQLFQMRVRMKNLMGIMEGGSIPTLSNLENAMKAEQAAPPGTAR
RKRRSESRRQFADSASTRPSPRGFGAKN
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggaagcaatgcaaatttcggctactgcttcccgccacttctcggcgactttgggtccc
ttttcgaccaaccgcagccccacaaaacctactaaacttgccacttcatgggcctcctcc
gcttccaccaatttggcttccctttcttccaggaacttgttcactagagagatatggggg
tgggtaaattccaagacggccacttctaggagggaaatgcgaggtgttgtaagagctgaa
atgtttggccaactcaccagtggtctcgaagctgcttggaccaagcttaaaggagaagag
gttttgacaaaggagaacattgtggagccaatgcgtgatattaggagagcgcttctggaa
gcagatgtgagtcttcctgttgttagaaggtttgtccaagctgtaagtgaccaggcagtt
ggagttggccttattcgaggagtaaagccggatcaacaattagttaagattgtaaacgat
gagcttgtgaaactgatgggaggagaggtttctgaactggtcttttcaaaatctggcccc
actgttatattattggctggtctacaaggggttggaaaaacaactgtttgtgccaagtta
gctaattatcttaaaaagcagggtaagagcagcatgcttattgcaggagatgtatacaga
cctgctgctattgaccaacttgttattttgggtgaacaggtaggtgttcctgtttataca
gcagggactgaggttaaaccatccgaaatagcaaagcaaggcttagaagaggccaaaaag
aagaagatagatgtagtgataatggatactgcaggaaggctgcagatagataaaggaatg
atggatgagttgaaagaagtgaagaaagtattgaatcccacagaagttttgcttgttgtg
gatgcaatgactggccaagaagctgctgcgttggtcacaacattcaatgttgagataggc
attactggtgccattttgacaaagctagatggggattctagaggtggtgcagccttgagt
gttaaagaggtgtctgggaagccaatcaagcttgtaggacgtggagagcgcatggaggac
ctagagcctttctatccggaccgcatggctggacgtattttgggaatgggtgacgttctc
tcatttgttgagaaagcacaagaagtcatgcgccaagaagatgctgaagagttgcaaaag
aagataatgagtgcgaagtttgatttcaatgatttcctaaagcagacccgtgctgttgcg
cggatgggttccatgacccgtgttattggaatgatccctggaatggggaaggttacgcca
gcccaagttcgagaggcagagaagaatttaaagttaatggaggcaatgattgaagccatg
accccagaggaaagggagaagccggagttattggctgagtctcctgacaggaggagaaga
attgctaaagattctggtaaaacagaacagcaggtgagtcaacttgttgctcaactcttc
caaatgcgagttcgcatgaagaatttgatgggtatcatggagggtggatctattcctaca
ttgagcaatctcgagaatgcaatgaaagcagaacaagcggctcctcctggtacagctaga
agaaagagaagatcagagtcgagaaggcagtttgcagactcggcatcaacgaggccaagc
cctcgtggttttggtgcaaagaactag

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