Gossypium hirsutum (upland cotton): 107899396
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Entry
107899396 CDS
T04793
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107899396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107899396
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
107899396
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107899396
Prokaryotic type
107899396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
107899396
NCBI-ProteinID:
XP_040947197
LinkDB
All DBs
Position
D04:complement(23388268..23391257)
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AA seq
260 aa
AA seq
DB search
MNPTPQFKPVASKSRKTVRSSQCLEGRRSQSSKAATVRTRTKPSRKQTRPQSSPVSLPCF
RNTTILPPEFFQIDALDLAPHLLGKFLRRDDVVLQITEVEAYRPNDSACHGRFGVTARTA
PVFGPGGHAYVYLCYGLHTMLNVVADKEGAGAAVLIRACAPVCGLETIQERRGQQTEKPI
LLTGPGKVGQALGITTEWSNHPLYTPGGLELLDGPEPDKILIGPRVGIEYALPEHVNALW
RFAIAGSPWISAPKNTLRLP
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaactccccaatttaaaccagttgcttcgaaatccaggaaaacagttcggtcg
agccaatgcctggagggacggaggagtcagagttccaaagcagcgaccgttaggacccgg
accaaaccaagccgtaaacaaactcggccgcaatcttctccggtttctctcccttgtttt
cgcaataccacgatactgcccccggagttctttcaaattgacgctcttgatttggcgcca
catttgcttggcaagtttttaaggagagatgatgttgttcttcaaatcactgaggtagag
gcttataggccaaatgattcagcttgtcatggtagatttggagtcactgcaagaacagcc
cctgtttttggtcctggagggcatgcttatgtttatctttgctatggacttcatacgatg
ctcaatgttgttgctgacaaagaaggagctggggctgcagtgttaatacgtgcatgcgct
ccggtgtgtggtttggagactatccaggagcgtcgtggtcagcaaactgaaaagcctatt
cttctcactggacccggaaaggttggtcaggcacttggaattaccacagaatggtctaac
catccactatacactcctggtggtttggaactcttggatgggcctgaaccggataagata
ttaattgggcctcgtgttggcattgagtacgctttacctgagcacgttaacgccttgtgg
agatttgccattgccggttccccatggataagtgctcctaaaaatactctcaggcttccc
tag
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