Gossypium hirsutum (upland cotton): 107899407
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Entry
107899407 CDS
T04793
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107899407
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107899407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
SNAP
Ig_TRAPPC9-Trs120_4th
TRAPPC13_C
Ig_TRAPPC9-Trs120_1st
Ig_TPPC8_3rd
Motif
Other DBs
NCBI-GeneID:
107899407
NCBI-ProteinID:
XP_016680600
UniProt:
A0A1U8IRA4
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All DBs
Position
D04:complement(32135521..32168978)
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AA seq
1284 aa
AA seq
DB search
MVDPANTSLGKMLLEEITPVVMVLCTPLVEESCLKNGLSFVQMLSPFCDFTNIDVPVRTA
SDQPYRLHKFKFRLFYASDIRQPNLEVAKERLKQVITKAGEDDFPEIYSDLPQVNDLLSR
HESEILPTWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSRDEEPINRFIDLFNTNKLP
SFLSDGAMDPKVLKHYLLVHDNQDGDSEKATKILTEMRSTFGPNDCQLLCINFSQDGQTR
HKDTPWSTFRSDALATEHLGRFLKLDDLNEIKNLMQELSSKHIIPYMEQKIRLLNQQVSS
TRKGFRNQFKNLWWRKGKEDALDTTNGPVYTFSSIESQIRVLGDYAFMLRDYELAVSSYR
LISTDYKLDKAWKRYAGVQEMIGLTYFMLDQSRKEAEYCMENAFNTYLKLGSAVQQNATR
CGLWWIEMLKTRNQIKEAATVYFRICGEDLLHSAVMLEQASFCYLLSKPPMLHKYGFHLV
LSGDHYKKCDQIKHAIRTYRNAVSVYRGTTWNLIKDRVHFHIGQWYASLGMYDVAVTHML
EILASSHQSKTSQELFLRDFLHIVQKTGKTFEVLKLQLPVINISSLKVIFEDHRTYASPA
AASIKEGVWRSLEEDMIPSLFAKSNWLDVQSKLIPRKYKESNICVAGEAIIVDIEFKNPL
QIPISILNVSLICELSANPEELNSEANSSNVEPQNDEYKTSTSTGDINSSLVLSEVDFSL
EGGETILVQLTVTPRVEGILTIVGVKWKLSSSVVGLHNFESNSVNKRIAKGRRKPKHSPS
ADLKFIVIKSLPRLQGFIPSLPEKTYAGDLRHLVLELNNQSKFPVKNLKMKISNPRFLNA
GNQSYLNVEFSACLEKKLNVEQSVGHANAKKMLQNVFHFPEDISVQEETSLSWPLWFHAA
VPGNISLYITVYYEMENVSSIMKFRTLRMHYNLQVLPSLDVSFELSPCPSRLEEFLLRMD
VVNKTSSECFQIHQLSSVGQQWDVSLLQPVDSILPSQSLFAGQVLSCFFMLKYHRKSSTS
EDSNPLFLQSDVRLGPPGNSEALFDVCSSPLADFHDYERLYQGMSCQGNVDFVFITQLWR
GNIDSGAPHRPLLFSHHVCHCSLSSFSPISWFVDGPRTIQHNFSASPCGVNLKMTINNSS
DAASSVHVKTFDPPSSNSQSIDATASQSGLPLENQVGWFSIPAVNDTKVITTDALAKRIT
KSVSLESAPQFIWTGSSSTKLKLQPRATAEVPLQICVFAPGIYDLSNYALNWNLAPIEES
QGEANKSSGECQGYPYYLTVVQST
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaatacttcgcttggaaagatgctgttggaggagatcactccggtg
gttatggtgctttgcactccactcgtggaagaatcttgccttaagaacggcctctccttt
gtccaaatgctctcccctttctgcgacttcaccaacatcgatgtgcctgtacggacggcg
agtgatcaaccctacaggttgcacaagttcaaatttaggttgttttacgcctcggatatt
cggcaacccaatctcgaggtagcaaaggaaagactaaagcaagttattactaaggcggga
gaggatgatttccctgaaatatattcagatctacctcaagtgaatgatcttctctcaagg
catgagtctgaaattttaccgacatggtttcagtttttcaataaagagcttgtacgtacc
ttgtctttttctgatcatgaagcttttgatcatcctgtggcatgccttttggttgtttct
tcaagggatgaggaacccataaatagatttatagacctctttaacaccaacaaattgccc
tcctttctcagtgatggtgcaatggacccaaaggttttgaagcattacttacttgtgcat
gataatcaagatggtgattcagagaaggctactaaaattttgactgagatgagaagtaca
tttggcccaaatgactgtcaattactttgcattaatttttctcaagatgggcagactcgc
cataaagataccccttggtctacttttagatctgatgctttagctactgaacatcttggt
cgcttcctcaaactagatgaccttaatgaaattaagaatctcatgcaagaattatcatct
aaacacatcattccttacatggaacaaaagatacgtttgttgaaccaacaggtttcttct
acaaggaaaggttttaggaaccaatttaaaaacttatggtggaggaaggggaaggaagat
gcattggacaccacaaatggtcctgtgtatacctttagctcaattgaatctcagattaga
gttttgggtgactatgcattcatgttacgagactatgagcttgccgtctccagctatcgc
ctaatttccactgattacaagcttgataaagcctggaagcgctatgctggtgtgcaggag
atgatcgggcttacatacttcatgcttgatcaatcacgaaaagaagcagagtactgcatg
gaaaatgcatttaatacctatttaaagcttgggtctgctgttcaacaaaatgctacgaga
tgtggtctttggtggatagagatgctgaagacaagaaatcagattaaagaagctgccact
gtttatttccgcatttgtggtgaggatcttttacattcagctgtgatgctcgagcaagct
tctttttgctacttgttatcaaaaccaccaatgctgcataaatatgggtttcatcttgtt
ctctctggtgatcattataaaaaatgtgatcagattaaacatgcgatacgcacatatagg
aatgctgtttctgtttacagaggaaccacatggaaccttattaaagatcgtgttcatttc
cacattggacagtggtatgcttctcttggcatgtatgatgttgcagtcactcatatgctg
gagatcttggccagcagtcatcaatcaaagacatcacaggagctatttctgagagatttt
cttcatattgttcagaaaactggaaaaacgtttgaggtgttgaaacttcagttacctgtt
atcaacatttcctcacttaaggtcatttttgaagatcatcgaacttatgcatctccagcg
gctgcaagcatcaaagaaggtgtatggcgttcactggaggaggatatgatcccatcattg
tttgccaagtccaactggctggatgtgcaatcaaagcttattccgagaaaatataaagaa
tcaaatatttgtgtggcaggagaagcaataatagtggatattgaatttaaaaaccctctg
caaatccctatttccatcttaaatgtttcattgatatgcgagctttctgcaaatcctgaa
gaattgaactctgaggcaaatagttcaaacgtcgagccccagaatgatgaatacaaaaca
tcaacttccactggggatattaattcatctttggttttatcggaggttgacttttcacta
gaagggggtgaaacaatcttggtgcaactaaccgttacaccaagagtagaaggcattctg
acaattgttggtgttaaatggaaattgtcaagttcagtagtaggcttgcataattttgag
tctaactctgtgaacaaaagaattgccaagggaagaaggaaacccaagcattcgcccagc
gctgacttgaagtttatagtgattaagagtctacccaggcttcagggttttattccttct
ttaccagaaaaaacatatgcgggagacttgcgacatcttgtgttggagttaaataaccaa
tcaaagtttcctgtcaagaatctaaagatgaagatcagcaacccgagatttctaaatgct
gggaatcagagttatttaaatgtagaattttctgcttgcttagaaaagaagttgaatgtt
gagcaaagcgttgggcatgctaatgctaagaaaatgttgcagaatgtgttccattttcct
gaggacatatcagtgcaggaggaaacatcattatcttggcctctttggtttcatgctgct
gttcctggcaatatttctttgtacattactgtatattatgaaatggaaaatgtatcaagc
attatgaaattccgcactctacgtatgcattataatttgcaggttttaccatcgttggat
gtatcatttgaacttagtccttgtccatcaagattggaagagttcctcttgcgtatggat
gttgtcaacaagaccagttctgaatgtttccagattcatcaattgtcttctgttgggcag
cagtgggatgtctcattgctccaacctgttgatagcattttaccgtctcaatccttattt
gctggtcaagtattgtcatgcttcttcatgcttaagtatcacaggaagtcatcaacttct
gaagacagtaatcctcttttcctccagagtgatgtaagactcggacctccaggaaacagt
gaagccctcttcgatgtatgttcttcacctttggctgatttccacgattatgagagattg
taccagggaatgtcatgtcaggggaatgttgatttcgttttcatcactcaactgtggagg
ggtaatattgattctggtgctcctcatagaccacttcttttttcccatcatgtttgtcat
tgcagtctttctagcttcagtccaatatcttggttcgtggatgggcctcggaccatacaa
cataacttctcagcttctccatgtggagtaaatttgaagatgactataaacaattcatcc
gatgctgcttcatctgtccatgtcaagacctttgatccccccagtagtaacagccaatca
atcgatgctactgcatctcagtcaggtctccctctggaaaatcaagtagggtggttcagc
attccagcagtgaatgacacgaaagtcatcacaaccgatgctcttgcaaaacgtattacg
aagtcggtttccctggaaagtgccccccagttcatttggacaggttcaagctctactaaa
ctcaaacttcaacctagggcaacagctgaagttcctcttcagatctgtgttttcgctcct
ggaatatacgatttatcaaactatgctttgaattggaatctagcacccattgaagaaagt
caaggagaagcaaacaagtcttcgggagagtgccaaggatatccctattatcttacggtg
gtgcagtctacttaa
DBGET
integrated database retrieval system
