Gossypium hirsutum (upland cotton): 107899443
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Entry
107899443 CDS
T04793
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107899443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107899443
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107899443
03012 Translation factors [BR:
ghi03012
]
107899443
04131 Membrane trafficking [BR:
ghi04131
]
107899443
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107899443
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
107899443
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
107899443
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107899443
Membrane trafficking [BR:
ghi04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
107899443
Exosome [BR:
ghi04147
]
Exosomal proteins
Proteins found in most exosomes
107899443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
Semialdhyde_dhC
AAA_22
SRPRB
Motif
Other DBs
NCBI-GeneID:
107899443
NCBI-ProteinID:
XP_016680652
UniProt:
A0A1U8IRB4
LinkDB
All DBs
Position
D04:complement(18367465..18370348)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGILKPGMVVTFGPSGLTTEVKSVEMHHESLPEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELVTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaagactcacattaacattgtcgtaattggccatgtcgactctggaaag
tcaaccaccactggccacttgatctacaagcttggaggtattgacaagcgtgtcattgaa
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctt
gacaagttgaaggctgagcgtgaacgtggtattaccattgatattgccttgtggaagttt
gagaccaccaaatattactgcactgtcatcgatgcccctggacatcgtgactttatcaag
aacatgattactggtacctcccaggccgattgtgctgtacttatcattgactctaccact
ggaggttttgaggcaggtatttccaaggatggacagacccgtgagcatgctctgcttgct
ttcactctcggtgtcaagcaaatgatttgctgctgcaacaagatggatgccacaaccccc
aaatattcaaaggctaggtatgatgaaattgtgaaggaagtgtcttcctacttgaagaag
gttggttacaaccctgagaagattccttttgtccccatctccggttttgagggtgacaac
atgattgaaaggtccaccaaccttgattggtacaagggtccaactcttctcgaggctctt
gaccagatcaatgagcccaagagaccctctgacaagccactccgtcttccacttcaggat
gtgtacaagattggaggtattggaactgtccctgtgggtcgtgttgaaactggtatcctc
aagcctggtatggttgtaacctttggtccctctggattgaccactgaagttaagtctgtt
gagatgcaccatgagtctcttcctgaggctcttccaggtgacaatgttggcttcaatgtc
aagaatgttgctgtgaaggatctgaagcgaggatatgttgcttcgaactcaaaggatgat
cccgccaaggaggcagctaatttcacttcccaagtcatcatcatgaaccacccagggcag
attggaaatggatatgcacctgtccttgactgccacacctcccacattgcggtcaagttt
gcagagttggtgaccaagattgacaggcgatctggtaaggagcttgagaaggaacccaag
ttcttgaagaatggtgatgcaggatttgttaagatgattcccaccaaacccatggttgtg
gaaacattctctgagtatcccccactgggtcgttttgccgtgagggacatgaggcagact
gttgctgtcggcgttatcaagagcgtggagaagaaagatccatctggagccaaggtgacg
aagtctgctgccaagaagggtgggaagtga
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