KEGG   Gossypium hirsutum (upland cotton): 107899653
Entry
107899653         CDS       T04793                                 
Name
(RefSeq) zinc finger protein JACKDAW
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ghi03000]
    107899653
Transcription factors [BR:ghi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    107899653
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_jaz zf-C2H2_STOP2_C zf-met zf-C2H2_4 zf-C2H2_6
Other DBs
NCBI-GeneID: 107899653
NCBI-ProteinID: XP_016680913
UniProt: A0A1U8IX11
LinkDB
Position
D04:complement(42776276..42779215)
AA seq 465 aa
MSGDGFSLPVSIGGFVHQEQNNTNPNPKSNPVKKKRNLPGNPDPDAEVIALSPKTLMATN
RFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRNNKEPVKKKVYICPEKTCVHHDPSRAL
GDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSRKDSF
ITHRAFCDALAEESARFSSVAGAATNLNFRNDVVNLPIGFGGIPQFGSGFTQDVSGMTVS
GLPEMVQIASGNLFRSSSLNKFGTDSNPPLLQLPQGLKEEGGSKGKLMESLSPLYSDTQN
EQSKPAAPMSATALLQKAAQMGSTRSKPTSFFGNSFGVMSSTSSQRSASLRSTQNRNGQL
QQIYPNVKQQESNLMASSSVSMSANAGLGTSNNFDRLILQTGVKQNAPNQLKMHPGSNSI
DQSLTRDFLGMGNDQSARPFLPQELAKFASIGSTMGLNQFSSSNH
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtctggtgatgggttttctttacctgtttcaataggagggtttgttcatcaagaacaa
aataatacaaaccctaaccctaaatccaatcctgttaagaagaagagaaatcttccagga
aatccagatccagatgctgaagttattgctttatctcccaaaactctcatggctaccaac
agattcatatgtgaaatatgcaacaaaggtttccaacgagaccaaaacttgcagcttcat
cgaaggggtcacaatcttccatggaagctgaagcaaagaaacaacaaagaaccagttaag
aagaaggtatacatttgccctgagaaaacctgcgtccaccatgatccatctagagcactc
ggtgacctcactgggataaagaagcatttcagcagaaaacatggagaaaagaagtggaag
tgtgagaaatgttcgaagaaatacgccgttcagtccgactggaaagctcactccaaaact
tgtggtactagggagtacaagtgtgactgtgggacactgttttccagaaaagacagcttt
atcacacatagggctttctgtgacgccttagctgaagagagtgctagattcagttccgtt
gcaggtgcagccacaaatctaaatttcagaaacgatgttgtgaatctgcctattggattt
ggtggaattcctcagtttggttccggttttacacaagatgtcagtgggatgactgtatca
ggtctgcctgagatggtccaaattgcttcaggcaatctgtttcgttcatcttcactgaac
aaatttggtacagattccaatcctcctctattgcaattgccacaaggtctaaaagaagaa
ggtggaagcaaaggcaagttgatggaaagcttgtcgcctctctactcggatactcaaaac
gagcaatccaagcctgctgcaccaatgtctgcaactgcgcttttgcaaaaagcagcccag
atgggttcaacaagaagcaaaccgacgtccttctttgggaacagttttggtgtaatgagc
tcaacttcttctcaaaggtcagctagtttgagatcgactcaaaatagaaacggtcagctg
cagcaaatatacccaaatgtgaagcaacaagagagtaatttaatggcgtcaagtagtgta
tcaatgagtgctaatgcaggtctcggaacaagcaacaactttgataggctcatcttacaa
acaggagtgaaacaaaatgccccaaatcaattaaagatgcaccctggttcaaactcaatt
gaccagagcttaactagggatttccttggcatgggcaatgatcagtctgctcgtccattt
ttaccccaggaactagctaaatttgcatcaattggctcaaccatgggtctgaatcaattc
agcagcagcaaccactaa

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