Gossypium hirsutum (upland cotton): 107899658
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Entry
107899658 CDS
T04793
Name
(RefSeq) syntaxin-71
KO
K08506
syntaxin of plants SYP7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107899658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107899658
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
107899658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF5089
Ran-binding
TBCC_N
NPV_P10
Motif
Other DBs
NCBI-GeneID:
107899658
NCBI-ProteinID:
XP_016680919
UniProt:
A0A1U8IYA4
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All DBs
Position
D04:complement(42849339..42852357)
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AA seq
267 aa
AA seq
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MSVIDILTRVDVICKRYDKYDVEKQRDQNVSGGDAFARAYAAVEADIESALEKVELASKE
KSKASAVAVNAEIRRTKARLLEEVPTLQRLAVKKVKGISTEEMATRNDLVLALPDRIQAI
PDGTAATKQTGGWMSSASSASRTAIKFDSDERFDNEYFQESEQSSQFRQEYEMRKMKQDQ
GLDMISEGLDTLKNMAHDMNEELDRQVPLMDEIDTKVDKAAADLKNTNVRLKDTVTQLRS
SRNFCIDIVLLCIVLGIAAYLYNVLKK
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaatcgatatattgacaagagtagatgtgatctgcaagaggtacgataaatac
gacgtcgaaaagcagcgtgaccaaaatgtctccggcggtgatgcttttgctcgcgcttac
gccgcagtcgaagccgacattgaatccgctcttgagaaagtggaacttgcttccaaggag
aaaagtaaggcatctgctgttgcagtcaatgctgagattcgtcgaaccaaggctcgattg
cttgaggaggtccctacgctgcagagattggctgttaagaaggttaaagggatttcaact
gaagagatggctactcgtaatgatctggtccttgcattgccggacaggattcaagctata
cctgatggaactgctgctactaaacaaactgggggctggatgtcttcagcatcttcagct
tctcgtactgcaattaagtttgattcagatgagcgatttgacaacgaatactttcaagaa
tctgagcagtcaagtcagttcaggcaggagtatgaaatgaggaaaatgaagcaggaccaa
ggtttggatatgatttcagaaggtttggatactttaaagaacatggctcatgatatgaat
gaggaactagataggcaagttcctttgatggatgaaattgacaccaaggtggacaaggca
gctgctgaccttaagaataccaatgttagacttaaagatactgtcacacagttgaggtcc
agccgaaatttctgtattgatatcgtattgctgtgcatagttctgggaatagctgcctat
ttgtacaatgttctgaagaagtga
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