Gossypium hirsutum (upland cotton): 107900296
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Entry
107900296 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107900296
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
107900296
NCBI-ProteinID:
XP_016681444
UniProt:
A0A1U8IZR4
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Position
A11:complement(65247178..65249606)
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AA seq
606 aa
AA seq
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MISPSSSIMAVDSTLSSVVGASFSEKDAKALQFIEEMTKNVDSVQERILGEILSRNADTE
YLKRFQLNGATDRDTFKSKVPVVTYEDLQPEIQRIANGDKSPILSSHPISEFLTSSGTSA
GERKLMPTIHEELNRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFIKAETKTPGGLLARPV
LTSYYKSDHFKSRPYDPFNVYTSPNETILCPDSIQSMYAQMLCGLIMREEVLRVGAVFAS
GLLKAIRFLQLNWKQFAHDIETGTLNPKVTDPSVRECMSKILKPNPELAAFITKECSEEN
WECIITRIWPNTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLKPMCK
PSEVSYTIMPNMAYFEFLPHDDSSAQDSSRDSPPRLVDLADLEVGKEYELIVTTYAGLCR
YRVGDILRVTGFHNAAPQFRFIRRKNVLLSIDSDKTDESELQQAIENASVLLKEFNTSVV
EYTSYADTKQIPGHYVIYWELFVKDAANAPTDEVLSQCCFQMEESLNAVYRQCRVADSIG
PLEIRVVKNGTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSKHFSRALPHW
TPDRRR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatatctccatcatcatcgatcatggctgttgattcaactctctcctccgtagttggt
gcctcctttagtgagaaagacgccaaagctcttcagttcattgaagagatgacaaagaat
gttgattctgttcaagagaggattttaggtgagatcttaagtcgaaatgccgacactgag
tacctcaaacgcttccagctcaatggagctacggaccgggacacattcaagtccaaagtc
cctgttgtcacttacgaggatcttcagcctgaaatccaacgtatcgccaatggtgacaag
tctcccatcttatcttctcaccccatttcagagtttctgaccagttctggaacttcagct
ggagaaaggaagctcatgccaacaattcatgaagagttgaatcgtcgtcaactcttgtat
agtcttctcatgcctgtaatgaatctttacgtcccgggattggacaaagggaagggtctt
tatttcttgtttataaaagctgaaacaaagacccctggagggcttctggcacgccctgtt
cttaccagctactacaaaagcgaccactttaagagcagaccatatgatcctttcaatgtt
tacaccagccccaacgagaccattctttgccccgactcgatccagagcatgtatgcccag
atgctctgcggcttgatcatgagggaagaggtccttcgtgttggtgccgtcttcgcttct
ggcctgctcaaggccattcgtttcctgcaactcaactggaaacaatttgctcatgacatc
gaaaccggaactttaaaccctaaagtcactgatccttcagttcgtgaatgtatgagcaaa
atcttgaaacctaacccagaacttgctgctttcattaccaaggaatgctcagaggagaac
tgggaatgcatcatcactagaatttggcccaacacaaagtaccttgatgtgatcgtaact
ggagctatggctcaatatattcccacccttgaatattacagtggtggcttgccaatggct
tgcaccatgtatgcatcctcagagtgttattttggtcttaacctcaagccaatgtgcaag
ccatccgaggtctcatatactatcatgccaaacatggcctattttgagttcttgcctcat
gatgactcgtccgctcaagattcatctcgtgactcacccccacgcctcgttgacctcgcc
gatctagaagttgggaaagaatatgaactcattgtcacaacttatgccgggttgtgccgt
tacagagtcggcgatatcctccgagtcaccggtttccacaacgcggccccgcaattccgt
ttcattaggaggaagaacgtgttgctgagcatcgattccgataaaaccgacgagtccgag
ttgcaacaggccatcgaaaacgcttccgtcttgctaaaggaattcaacaccagcgttgtt
gagtacacgagctacgcggacaccaaacaaataccaggtcactacgttatctactgggaa
ttattcgtaaaagacgctgccaatgccccaacggacgaagttttgagccagtgttgcttt
caaatggaggaatcattgaacgcagtgtaccgtcagtgccgtgttgcagactcaatcggc
ccactggagataagagtagtgaagaacggcacattcgaggagttaatggactatgcaatt
tcaaggggtgcttccattaatcaatacaaagttccaagatgtgtcagcttcactccaatc
atggaacttctcgactcaagggtggtttcaaagcatttcagtcgagctttaccacactgg
accccggaccgtcgtcgttga
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