Gossypium hirsutum (upland cotton): 107900428
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Entry
107900428 CDS
T04793
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107900428
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
107900428
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
107900428
Prenyltransferases [BR:
ghi01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107900428
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GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
107900428
NCBI-ProteinID:
XP_016681517
UniProt:
A0A1U8ITS8
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Position
D06:28701227..28703266
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AA seq
380 aa
AA seq
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MCITLSLSSKPCIGVCNGSLQSPKSMVTTARTEVITAPKRPNTFPGLTKQGISDIDLRVQ
EVVRRQSWTNSLDGEVNCRKPPFEPMFIDDAYDKCRNICAEYAKTFYLGTLLMTKERQKA
IWAIYVWCRRTDELVDGPNAEYMSPAVLERWEERLQDIFEGRPYDMLDAALSDTVCNFPL
DTKPFRDMIEGMRMDTRKSRYESFQELYLYCYYVAGTVGLMSVPVMGIAPESFVSAYTIY
NAALYLGIGNQLTNILRDVGEDALRGRVYLPQDELAQFGLTDKDVFSRKVTDAWRDFMKE
QIIRARSFFNLAEEGASQLDKDSRWPVWSSLMLYRKILDAIEDNDYDNLTKRAYVGRTKK
LLTLPLAYTRALSKPSLYLR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtgtataacattatctctttcatctaaaccttgcatcggagtctgcaatggaagctta
cagtcgccgaaatccatggtcacaacggcacgaactgaagtgatcactgctccaaagaga
ccaaacaccttccccggattgacaaagcaaggcatttctgacatcgatttacgagtccaa
gaagttgtccgaaggcaatcttggactaacagcttagatggcgaagtcaactgtagaaaa
ccgccgttcgaacctatgttcatcgatgacgcttatgacaagtgtaggaacatttgtgcg
gaatatgcgaagactttctatctaggcaccttgttgatgacaaaggagcgacagaaggcc
atatgggcaatttatgtttggtgcaggaggactgatgaactggtcgacggcccgaatgcg
gagtacatgagtccggcagtactcgaaaggtgggaagagagactgcaagacatcttcgag
ggacgcccctatgacatgctcgatgctgcactatccgatactgtttgcaactttcccttg
gacactaagcctttcagggacatgattgagggcatgagaatggatacaagaaaatctcgg
tatgagagtttccaagagctttacctttactgctattatgtagcaggcactgttggctta
atgagtgttccagtaatgggaatcgcaccagaatcctttgtttcggcttatactatatat
aacgcagcactctacttgggcattggaaatcagttaacaaacattcttcgagatgtaggg
gaagatgctttgaggggaagagtttatcttccacaagatgagcttgcacagttcgggtta
accgacaaggatgtcttctccagaaaggtaaccgatgcctggagagatttcatgaaagag
caaattattagggcaagatcctttttcaatctagctgaggaaggagcttcccaacttgac
aaggacagccgctggccggtttggtcgtccttgatgttgtatcgcaagattttggatgca
attgaggataacgattatgataacttgaccaaacgagcctatgttggaaggactaagaaa
cttctcacattacccttagcatacactagagctttgtccaaacctagtttgtaccttcgt
tag
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