Gossypium hirsutum (upland cotton): 107900632
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Entry
107900632 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107900632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107900632
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107900632
Complex B
107900632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
107900632
NCBI-ProteinID:
XP_016681791
UniProt:
A0A1U8IUP5
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Position
A10:complement(19110097..19115058)
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AA seq
475 aa
AA seq
DB search
MGDYNDAFMRNQNAAAAVQARVKPPQNRANIQQLKLIGQSHPTGLTANLLKLFEPRPPLE
FKPPPEKRKCPPYTGMAQFVSHFAEPGDPEYAPPVQEAETPAQRRARIHKLRLEKGLEKA
AEELKNYDPNNDPNVSGDPYKTLFVARLNYETSESRIKREFESYGPIKRVRLVTDKSTNK
PRGYAFIEYMHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRIG
GEDVTQREQIQSGPSRSEEPRIREDRHGDRDREKSRERGREREREREKSRERSHDRPRDR
DREDRHHRDRERTRDRDRDRERDRSGRDRDRARERGRDRGRDYERDRERDRDRDRDRDRD
YDAGDYDRDRGRSRDRDRESDYDRVESKHERDRHSERDYDHGEPDEDHGWFEQHDHGHRR
SDLDDQHYEYYDHHRGRGEYDLDAHGDRYDQYSDRDRDRDRDRDRYDGMEEDDYR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggagattacaacgatgccttcatgcgcaaccaaaacgccgccgccgccgttcaggct
cgcgttaaaccccctcagaaccgcgccaatattcagcagctcaagctgattggccaaagc
catcctactggtttaacagctaaccttttgaagctttttgaaccacgacctccgttggag
tttaaaccgcctcctgagaagagaaaatgccctccgtatacaggaatggcacaatttgtg
agtcactttgctgagccaggagatcctgagtatgccccgcctgttcaggaagcagaaaca
cctgcacaacggagagcaagaattcataagttgcgactagagaagggcttggagaaggct
gctgaggaactgaaaaactatgatccaaataatgacccaaacgtttcaggtgatccatac
aagacattgtttgttgctagacttaattatgagacatccgagagtagaattaaaagggag
tttgagtcttatggaccgattaagcgggttcggttggttactgataaatccacaaataaa
ccaagaggctatgctttcatcgagtacatgcatactcgggatatgaaagctgcttataaa
caagctgatgggaggaagattgatggcagaagggttcttgtggatgttgagcgcggtagg
acagtccctaattggcgccctcgtaggctaggtggtggacttggaactaccaggattggt
ggtgaagatgttactcaaagggaacaaatccagtcaggaccgtctcgttctgaggagcca
cggattcgagaggatcgacatggtgaccgggacagggagaagtcccgtgaaagaggaagg
gaacgggagagggagcgtgaaaaatcacgtgagcgctcccatgacagaccgagagatcgc
gatagggaggatagacaccacagagatcgtgaaagaactagagacagagatagggacaga
gagagagaccgcagtggtcgtgatcgtgaccgagcacgtgaacgaggccgggatcgtggt
cgtgattatgagcgcgatagagaaagagaccgtgacagggacagggacagggacagggat
tatgatgctggtgactatgaccgtgaccgtgggcgttccagggatagggatagggaatct
gattatgaccgtgtcgagtccaaacatgagagagatcggcacagtgagagggattatgat
catggtgagccagatgaggatcatgggtggtttgagcagcatgatcatgggcataggcgg
tcggacctagatgaccaacactatgaatactatgatcatcatcgaggtcgaggagaatat
gatctggatgctcatggggatcgttatgatcaatattctgaccgtgaccgtgatcgtgat
cgtgatcgtgatcgttatgatggaatggaagaagatgattacaggtga
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