Gossypium hirsutum (upland cotton): 107900654
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Entry
107900654 CDS
T04793
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00270
Cysteine and methionine metabolism
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107900654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107900654
03032 DNA replication proteins [BR:
ghi03032
]
107900654
03036 Chromosome and associated proteins [BR:
ghi03036
]
107900654
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
ghi02048
]
107900654
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
107900654
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107900654
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
107900654
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107900654
Prokaryotic defense system [BR:
ghi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
107900654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
107900654
NCBI-ProteinID:
XP_040954380
LinkDB
All DBs
Position
D08:complement(55428562..55438535)
Genome browser
AA seq
1214 aa
AA seq
DB search
MEPTENSDSDSKSQSLTLVTTGDDNVEQPLPLEICVPEEIAAGADDNKLLPRRSASIFQL
FPIRSVFSRKSDIETVLERCLRRSPRNSALFVRESANVRPKAIVSLETEGCKRKIKESTT
VEGKNLRRSPRFTTISAAAENKKVLSLSAKVMQSRSSKSQRFKLKNKGAKIMNIERTNGM
GLRRSPRLTSAPPETKGRSSKTIFKSSDKGSYSETRSSGKLNSKRLCLSKTEEADKGTFP
LRHNETNLRLIIERQLRRSLKFSQVTKNGSSDISVRRLDMDEVIFSEEKLLGISPSSMHA
TENGDSNASFREHRREMSDEKQLKTPSSLSTLLAEGDSAEVNSSSNRLSNSCDEQPSKKF
KISSAESDMGTSDETFSKKAKGSSLSGKKKSQSKTDVIFIGNPIPDDEAQERWRWRYEMK
NTKSNRKLISSDDDDDDDEDKVVWNVECHYAQAEIDGCTINLGDCVYIKGEEAKHHIGKI
LEFFKTTDGENYFRVQWFYRAEDTVSTEIKISFRSCTISYPDLCCFCSAHHAKVMKQEAA
FHDERRVFYSTVMNDNPIDCIISKVSVTQISPKLGLKSNSLPRSDFYFDMEYCVDYSTFR
NLPPDNSFKSYSSSNCCKEVFPSTPAFSANIPSFGTYQAELTLLDLYSGCGGMSTGLCLG
AKASSIDLVTKWAVDSDKSASKSLKLNHPEAHVRNEAADDFLRLLKEWEKLCKRYVVDNL
ERTYPSRFRASEAVMKNASPAKDADTSADELEVSCLVDVCYGDPCNTGNRGLKFKVRWKG
YSASDDTWEPIEGLSNCQECIQEFVIKGFRSKILPLRGDVDVICGGPPCQGISGYNRFRN
VDSPLDDERNRQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRLVHMKYQAR
LGIIAAGCYGLPQFRLRVFLWGAHPSEKLPQFPLPSHDVIIRYWPPPEFERNTVAYEEGQ
PRQLEDALLLRDAISDLPPVSNNEVREEMTYEKPPETDFQRYIRSSKYVMTGSALDGATR
IKNLLYDHRPAPLSEDDYTRVCLIPKRKGANFRDLPGVIVGADNVARRDPTREKQFLPSG
KPLVPEYVFTFEQGKSKRPFARLWWDETVPTVVTYPYCHSQVILHPEQDRVLTVRECARL
QGFPDYYRFCGTIKDRYCQIGNAVAIPVGRALGYTMGMAFQKGSGNEPLMILPPKFSLST
NIQLAKSLSQSTDD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggagccaacagaaaattccgactctgattccaaatctcagtctcttactttggtcaca
accggagacgataatgtggagcagccattgcctctagagatttgcgtcccggaagaaatt
gctgccggcgccgatgataacaagcttctaccgagaagatccgccagtatctttcagtta
tttccaattcggagtgttttttcgaggaaatccgatatagaaacggtgcttgagagatgc
ctgagaaggtcgcccagaaattcagcgttgttcgttagggagagcgcaaatgtgaggccc
aaggccattgtgagtttagaaactgaaggttgtaaaaggaaaattaaggaaagtacaact
gtagagggtaagaatcttagaaggtcgccaagatttactaccatttcagctgccgctgaa
aataaaaaagtcctctctctttccgcgaaggttatgcagagtcgaagctcaaaaagtcaa
cggttcaagttaaaaaataaaggggcaaaaatcatgaatattgaaagaaccaatggaatg
gggttgaggagatctccacgattgacttcggccccacctgaaaccaaaggtcgctcatca
aaaactatttttaaatcctctgacaaaggttcctactctgaaacaagatcttctggaaag
ttgaacagcaagcgattatgtctctcaaagaccgaggaagcggataaaggaacttttcct
ttaaggcataatgagacaaacttaaggcttattattgaaaggcagttaagaagatctctg
aaatttagccaggttactaaaaatggtagcagtgatatatctgttagaagattggatatg
gatgaagtgatcttttctgaagagaagctcttgggaatttctcccagttccatgcacgca
acagaaaatggcgacagtaatgcatcttttagagaacataggagggaaatgtctgatgaa
aagcagttgaaaacaccttcctcactttctacattattggctgaaggtgatagtgctgaa
gtaaactcttcttccaatagattatccaattcatgtgatgaacagccttccaagaaattt
aagatctcatcagcagaatcagatatgggaacctcagatgaaacattctcaaagaaagcc
aagggctcgtctctttcaggaaagaagaagagccaatccaagactgatgttatatttata
ggcaatccaatcccggatgacgaagctcaagaaaggtggcgttggcgatatgaaatgaag
aatacaaaatctaacagaaaactcatctcatcggatgatgatgatgatgatgatgaagac
aaggtagtttggaatgtggaatgccattatgctcaagctgaaattgatggatgtaccata
aatcttggggattgtgtttatattaagggtgaagaagcaaaacaccacattggcaagata
ttagaattttttaaaacaacagatggagaaaattattttagagtccagtggttttataga
gctgaagatacagtaagtacagaaattaagatttcttttagatcatgcactatttcttat
cctgacctttgttgcttctgttctgcacatcatgcaaaggttatgaaacaagaggctgct
tttcatgatgaaagacgtgtattttattcaactgtaatgaatgataatcccatagattgc
attatttcaaaagttagtgttactcaaatatcacctaagttaggtttaaaatcaaattct
cttccccgatctgatttctattttgacatggagtattgtgtggattattcaacattccgc
aacttgccacctgataattctttcaagagctacagttcttcaaattgctgcaaggaagtt
ttcccttcgactcctgccttttcagctaatattcctagttttggaacttaccaggcagaa
ctcacactactagatctttactctggttgtggcggaatgtcaactggtttatgccttggt
gcaaaagcatcttccattgatctagtgacgaaatgggcagttgacagtgataagtcagca
agtaaaagcttgaaattaaatcatccagaggcacatgtcaggaatgaagctgctgatgat
tttcttcgactactgaaggaatgggaaaagctttgcaaacgatatgtagttgacaattta
gaaagaacatatccgtcaagattcagagcctcagaagcagtcatgaagaatgcaagccct
gcaaaagatgctgatacctctgctgatgaactcgaggtctcttgtcttgttgatgtttgt
tatggtgatccctgcaacacaggcaaccgtggactaaagtttaaggttcgctggaaggga
tatagcgcaagtgatgatacgtgggaaccaattgaaggcttaagcaattgtcaagaatgt
attcaggaatttgtaattaaaggattcaggtccaagatcttaccccttcgtggggatgtt
gatgttatttgtggtggccctccatgccaagggataagtggctataatcgctttagaaat
gttgattctccattggatgatgaaagaaatcgtcaaatagtggtcttcatggacatagtt
gaatacttaaaacctaagtttgttttgatggaaaatgtggttgatattttgagacttgac
aagggttctcttggaagatatgctttaagtcggttggtacatatgaaataccaagcaagg
cttggaataattgcagctggttgttatggtcttcctcaattccggttgcgtgtttttttg
tggggagcacatcctagtgagaagcttccacagtttccacttccttctcatgatgttatt
atcagatattggcctcctcctgagtttgagcgcaatacagttgcttatgaagaaggccaa
cctcgtcaacttgaagacgctcttcttctccgtgatgccatttctgatctcccacctgtt
tcaaataatgaagttcgcgaagaaatgacatatgaaaagcctcctgaaacggactttcaa
agatatataagatctagtaaatacgtgatgactggttctgcattagatggtgccacaaga
ataaagaacctattgtatgaccatcggcctgctccgttatctgaggatgattatacaaga
gtctgtctgattccaaagagaaagggggcaaattttcgagacctccctggtgtaattgtt
ggagcagacaatgtggctcggagggatccaacacgggaaaagcagtttttaccttctgga
aaaccattggttccagaatatgtatttacctttgaacaaggaaaatctaaaagaccattt
gcaagattatggtgggatgagactgtgccgactgttgtaacttatccttattgtcatagc
caggtaatattacatccagagcaagaccgagttctcacagtccgggaatgtgcaagatta
caaggttttcctgattattatagattctgcgggacaattaaagataggtattgtcaaatt
gggaatgcggttgcaattccggttggtcgagccttgggatacacaatggggatggcattt
cagaaagggagcgggaatgaaccactgatgatcctccctcctaagttttctctttccacc
aatatccagttagcaaaatcattgtcccaaagcactgatgattga
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integrated database retrieval system
