Gossypium hirsutum (upland cotton): 107900692
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Entry
107900692 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107900692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107900692
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Others
AP-4 complex
107900692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT
HEAT_2
Cnd1
INTS1_R4
HEAT_EZ
PDS5
TOR1L1_N
NPHI_C
V-ATPase_H_C
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
107900692
NCBI-ProteinID:
XP_040954349
LinkDB
All DBs
Position
D08:54717244..54725360
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AA seq
970 aa
AA seq
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SRYRVAKLEQLKTIGRELTKGSQGGFYQSKEFLDLVKSIGEARSKAEEDRIVLSEIETLK
RRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMIHDDSLLVKRTGYLAVTLFL
NEDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQIVELLAHPKEAV
RKKAIMALHRFYQKSPSSVSHLVSNFARXRLCDNDPGVMGATLCPLFDLITNDVNSYKDL
VISFVSILKQVAERRLPKAYDYHQMPAPFIQIKLLKILALLGSSDKQASENMYTVVGDIF
RKCDSSSNIGNAVLYECICCVSSIYPNHKLLESAADAISRFLKSDSHNLKYMGIDALGRL
IKISPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIDYMNSINDN
HYKTEIASRCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDD
TADSQLRSSAVESYLHILGEPKLPSVFLQVICWVLGEYGTADGKYSASYITGKLCDVAEA
YSNDETVKAYAVTALMKIYAFEIAAGRKVDMLPECHSLMEEFLASHSTDLQQRAYELQAV
IGLDAHAVESILPSDASCEDIEVDKALSFLNDYIQESIEKGAQPYIPESERTGMLNISNF
RNQDHHEASSHGLRFEAYELPKQTVQARIPPASLASTELVPVPEAMYPRESYQTTTVPSV
SSDAASTELKLRLDGVQKRWGRQTHFPSTSTSNSTSLKTVNGITQVDGSNTANSRTRETY
DSRKQVEISPEKQKLAASLFGGPSKTEKKSATGHKSSKPSSHMVKSSMEVASEKTSVQQP
PDLLDFGEPTVRSTAPSLDPFKDLEGLLEPTTQVSSAVNHSSTAAVTKSPDIMGLYTETT
AGAHHKDSDILSGLSKPPMTNMVGGTTTMQVAQSSKGPNLKDSLEKDALVRQIGVTPSSQ
NPNLFKDILG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
tcgaggtacagagtagccaagctggagcaattgaagacgattggtagggagctcaccaag
ggctcccaaggcggattctaccaatccaaagaatttctggatctggtgaagtccattggc
gaggctcgatccaaggccgaagaggaccgaattgttctcagcgagatcgagactctcaaa
cgccgcatctccgagcccgacatacccaagcgcaagatgaaagagtacatcatcagattg
gtttacgtcgagatgctcggtcacgacgcttccttcggttacattcacgccgttaagatg
attcacgatgatagcctcctcgtcaaacggaccggttacttggccgttacgctcttctta
aacgaagatcatgatttgatcattttgattgtcaataccatccagaaagatttgaagtct
gacaattacttggtggtctgcgccgccttgaatgccgtttgcaagttgatcaatgaggag
acaattcctgccgtcttgccgcagattgtggagttgctcgcacatcctaaggaggctgta
cggaagaaggccatcatggctctccatcggttttatcagaaatccccttcttctgtttcg
catctcgtctccaatttcgcaaggtagagactttgtgataatgatcctggagttatgggt
gcaactctttgcccactttttgatcttataacaaatgatgttaattcttacaaagatttg
gtcatcagctttgtaagcattcttaaacaagttgctgaacgcagactacctaaggcttat
gattaccatcagatgccagctccatttattcagatcaaattgttgaaaattctggcattg
cttggaagcagtgacaagcaagcaagtgaaaacatgtataccgtagtgggagacatattc
agaaaatgtgattcatcaagtaatataggaaatgctgtactctatgagtgcatatgctgt
gtttcctctatatatcccaatcacaagttattagagtctgcagcggatgctatatccaga
tttttaaagagtgacagtcataacctaaaatacatgggcattgatgctcttggccgatta
ataaagataagtccagagattgctgagcaacatcagttggctgttattgattgcttagag
gacccagatgatactctgaagagaaaaacctttgaactactgtacaaaatgaccaagtct
acaaatgtggaggttattgttgatcgcatgattgattacatgaatagcatcaatgacaat
cattataaaactgaaatagcatctcgatgcgttgaacttgcggagcaatttgcaccgagc
aatcaatggttcattcagaccatgaataaagtttttgagcatgcgggagatctagtcaat
attaaggtagcgcacaatttgatgcggttgattgctgagggatttggagaggatgatgat
actgcagacagtcaactgagatcatctgctgtggagtcatacttgcacattcttggtgaa
ccaaagctgccatccgtttttcttcaagtaatttgctgggtcttaggggaatatggaaca
gctgatggaaagtactctgcttcctatattactgggaagttatgtgatgtggcggaggca
tattcgaatgatgagactgttaaggcatatgcagttacagccctcatgaaaatatatgca
tttgaaatagcagcggggaggaaagtagatatgctgcctgagtgtcattctttaatggaa
gaatttttggcttctcactcgacagatttacagcaacgggcctatgaattgcaagctgtg
attggccttgatgctcatgctgttgagagtattctgccatcagatgcaagttgtgaagat
attgaggttgataaagccctttccttccttaatgattatatccaagagtcaattgaaaaa
ggtgctcagccctatattcctgagagtgaacgcactggaatgttaaatatcagcaatttt
aggaatcaagatcaccatgaagcttcgtcacatggtctcaggtttgaggcatatgagctt
ccaaagcaaacagtgcaagcgaggattcctcctgcatcacttgcttcaactgaacttgtt
ccagtgccagaggcgatgtatcctagggaaagctaccagactactactgtgccatctgta
tcatcagatgcagcatcaacagagctcaagctacgactagatggagtccaaaaaaggtgg
ggtaggcaaacacactttccctcaacatctacctcaaattccacatccctgaaaacagtt
aatggtatcacgcaagttgatgggtcaaatactgcaaattcaagaacacgtgaaacctat
gattctaggaaacaagttgaaatatctccagaaaagcagaaactggctgcttcgctgttt
ggaggtccatcaaaaacagaaaagaagtcggctactggtcataagagttcaaagccaagc
agccacatggtgaagtctagtatggaagttgcttcagagaagacatctgttcaacaacct
ccggacttgcttgattttggagaaccaactgtcagaagtactgctccttcactagatcca
tttaaagatctggagggtcttcttgagccaacaactcaagtttcttcagcagtgaatcat
agttcaactgctgctgttacgaagtcccctgatataatgggattgtacacagagacaact
gctggcgcacaccataaagacagtgatattttatctggcttgtcaaagccgccaatgaca
aatatggttggtggcactacaaccatgcaagtagctcaaagtagtaagggccccaacctt
aaagattcattggaaaaggatgcactggttaggcagataggtgttactccatcgagtcag
aatccaaacttgtttaaagatatactcgggtga
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