Gossypium hirsutum (upland cotton): 107900792
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Entry
107900792 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107900792
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107900792
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
107900792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107900792
NCBI-ProteinID:
XP_016681993
UniProt:
A0A1U8J079
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Position
D08:52846465..52849037
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AA seq
339 aa
AA seq
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MASPPPPLFYGVMGGGAVNFDENYNTSDRSHSSSSIDNVKPSIIVIILILSITVLLSVSL
YLLLRHLNRRCLSRVFRSSASNITASASHRVTPEQSPAPSFLDSLPMFTFSSITRRSNNG
STVSGDCAVCLSKFEPLDQLRLLPLCCHAFHAQCIDAWLTTNQTCPLCRSSLFASESDLM
KVLLQSSNAACAFTSGGTDSFRLEIGSISQQRTGSDSGDQRRSYSIGSFDYIVEEESQLN
RNQIHQRNMSDKEEVGRAEAISETSLAAEVANGRSRLKEYVDRLSFSLSSRAMSFRSSGR
LVTGSSGRSDISGADGDYDVEANRIGEEISEMFRWFSGV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccgccgccgcctttgttttatggcgttatgggaggaggggctgttaacttc
gacgaaaattataacaccagtgaccgctcgcattcttcctcgtcgatcgacaatgtgaaa
ccgagtattatagtcataattttgatcctttctataactgtgcttctctccgtctctctt
tatctcctccttcgccacctcaatcgccgatgcttgagtcgtgtctttcgttcttctgcc
tccaatatcaccgcctccgccagccaccgtgtcactcctgaacaatcgccggcgccttcg
ttcctagattctctccctatgtttacattctcttccattactcgccgctccaacaacggc
tcaacggtttccggagattgtgccgtttgcttgtcgaagtttgaaccgctggatcaactc
cggctgcttcctctctgttgccatgcgttccacgctcaatgcattgatgcttggctcact
acaaaccagacttgtcctctttgtcgctcatctctattcgcctccgagtccgatcttatg
aaggttttacttcagtcgtccaacgcagcctgtgcatttacaagtggcggtaccgatagt
ttccggctcgagatcggctctatcagtcagcagcgaacaggctctgactccggtgatcag
agacggtcttattccattggatccttcgattacattgtcgaggaagaatcgcagctgaat
aggaaccaaatacaccagagaaatatgtccgataaagaagaggttggaagagctgaggca
atatcggaaacgagcctcgccgcggaggttgctaacggaaggagtcggcttaaggagtac
gtggacaggctctctttttcgttatcatctcgtgccatgtcatttcgtagctcaggaagg
ttagtcaccgggagcagcggccgaagcgacatatccggtgccgatggagattacgacgtg
gaagccaatcgtatcggcgaggagatcagcgaaatgtttcgctggttctcgggggtataa
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