Gossypium hirsutum (upland cotton): 107900795
Help
Entry
107900795 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107900795
03012 Translation factors [BR:
ghi03012
]
107900795
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107900795
mRNA cycle factors
Stress granule specific factors
107900795
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-4
107900795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
107900795
NCBI-ProteinID:
XP_040954299
UniProt:
A0ABM3AJ50
LinkDB
All DBs
Position
D08:complement(52787910..52795534)
Genome browser
AA seq
1798 aa
AA seq
DB search
MSFNQSRSDKSEQQYRKSGRSASFNQQRSSSGAYGKGAGGVPAPSPSLSSSSSRSFKKSN
NAQGGQSRGTSPAVNSSNANSGNAPAGHNVQNGAHVQSQLQAIASGTAKPTESATSQRST
RAIPKAPTSQPATMSSDSNNPTTPIKASGDASKAFSLQFGSISPGFMNGMQIPARTSSAP
PNLDEQKRDQACHDSSFRSVPDMPTPAPKQQQPINDSVATVPSKSGEAHPAPKVKKDAQA
SVASPINQPQKPSLLSLPLNPIQMPFNHQPQVSMQFGGPSPIQSPTSIQMPMHIPMGNAP
QVQPPVFVPGLQAHPLSPQGMMHQGQGLSFSPPIGGQLPPHLGNLGMGIAPQYPQQQGGK
FGLPRKTTPVKITHPDTHEELRLDKRTDTYPEGGPSGPRSHPIVPSQSQSIPSFAPSHSI
NYYSNSMFYPPPSSLPFSSSQISPNAQGPRFNYPVSQGHQNISFMNSAAAHGSVPGSVQV
TVKPAAVSLGERVADSSLSSSLPAVEKGSTVQQPKPGTESLTSKSLSAAAKHSRVVPATN
LDESLPSNSVSSAPAATSEESMLVIASNEGRKESLVKSISIKDHQKKMSKKGLIQPTNQS
TSATGVASHTAEHGISSGSAVSETIEAKTALTSSSAVKDDSAPSVELKTETKREGLTSVS
SDVSGTGSNVDSLNMVQDEQLKPETSGIKGEEGKTLLEEHLTDNATLEISSQPAPLNSKE
LKSNKGPALKAIATSNVPTSGTSQKVLTEDVGGNLENERVTDSRDVSPSRTAETTDFKGS
HVDNTIASAAGSNEITVTKSFASDQQFDPVLAVDLSEPTSKYEREGVQVPSSNKTVPEVG
RTKSNTTRGKKKRKEILQKADAAGTTSDLYMAYKGPEEKKETVASAESNSVGLNLKQTSR
ETPHADAIESEKIAYKKAEPDDWEDAADISTTKLGTSDNGEKAHGRLGNHEKDGSRNIAK
KYSRDFLLKFAEKCTDLPNGFEIASDIVEALMVTNTNSNASHFVERDSYGSSGRIMDRQF
SGSRQDCRAGGMADDDRWIRQSGSFGPGRDLRLDLGYGAAAGFRPGQGGNFGVLRHPRGQ
APLTYVGGILAGPMQPMGPQGGMARNNPDSDRWQRASNYQQKGLIPSPQTPLQMMHKAER
KYEVGIITDEEESKQRQLKAILNKLTPQNFEKLFEQVKAVNIDNAVTLTGVISQIFDKAL
MEPTFCEMYANFCYHLAGELPDFSEDNEKITFKRLLLNKCQEEFERGEREQEEANKVEEE
GEAKQSEEEREEKRIKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGEYENPDEED
VEALCKLMSTIGDMIDHPKAKVHMDAYFERMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQ
QRRKVEGPKKIEEVHRDAAQERQAQTSRLARGPGINAGTRRAPMDFAPRGSMLSSLGSQM
GGFRGPPTQVRGLGAQDVRMDDRQSFEARTVSVPLPQRPMGDDSITLGPQGGLARGMSFR
GPPGVSSAPLADVPPASGDSRRVATGLNGFNAPSERTTYGSREDLIPRYGTDRSAVPATY
DHLSSQECGLNFGNRGPDNSFDRSSAASAAGQRSSFTQNVPPEKGWSEERLHDMSMAAIK
EFYSARDEKEVALCIKDLNSPSFHPSMIALFVTDSFERKDVERDLLAKLLVNLTKSHDGV
LSQVQLVKGFESVLSTLEDAVNDAPKAAEFLGQIFAKLVMENVISLKEIGHLIHEGGEEL
GRLLEIGLAGDVLGSTLGAIKAEKGESVFNEIRASSDLRLEDFRPPDPKKSRLLETFL
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatcaaggtccgataaaagcgagcaacagtaccgaaaatccgggcga
tccgcaagttttaatcagcagcggtcatcctcaggcgcttacggtaagggtgctggcgga
gtgcctgccccttcaccgtctctttcttcatcttccagtcgaagttttaagaagtctaac
aatgcacaaggagggcaatctagaggaacttcacctgctgtgaattctagtaacgcgaat
tctggtaatgctcctgctggccataatgtacaaaatggtgcgcatgtacagtcccagtta
caggcgattgcaagtggtactgccaagccgactgaatcggccaccagtcagagaagcacc
cgagctattccaaaggctccaacttctcaacctgccaccatgagttctgatagtaataac
cccacgactccgattaaggcttcaggagatgcatcaaaagcgttttctctacagtttggg
tccataagtcctggtttcatgaatggaatgcagattccagctagaactagctcagcaccc
ccaaatttggatgagcagaaacgtgatcaggcatgccatgattcttcttttagatctgta
ccggatatgccaactcctgctcctaaacagcagcaaccaataaatgattcagttgcaact
gttccatctaaatccggggaggctcatccagcacccaaggtcaaaaaagatgcacaagcc
tctgtggcatcccccataaaccagccacagaagccatcccttcttagtttgcccttgaac
cctatacagatgccatttaatcaccagccacaggtttccatgcaatttgggggacctagt
ccgattcagtctcctacttcaattcaaatgccaatgcatatacctatgggaaatgcacct
caggtgcagccaccagtttttgttccaggtcttcaggctcatccattatcacctcaggga
atgatgcatcagggtcagggcttaagcttctcgccacccataggtgggcagcttcctccc
catttgggcaacttgggaatgggtattgcccctcagtatcctcaacagcagggagggaag
tttggtcttcctcgtaaaactacccctgtcaagattactcatcctgacactcatgaagaa
ttaaggcttgataaacgaacagatacctatccagaaggtgggccatcaggtccaaggtct
catcctattgtcccttctcaatcccagtcaattccgtcatttgcaccttctcattcaatc
aactattattccaattccatgttttatccgccaccaagttctcttccattttctagtagc
cagatatcacctaatgcccaagggccgagatttaactatcctgttagccagggtcatcag
aacatttcttttatgaactcagcagcagcccatggttcagtaccaggttcagtacaggtt
acagttaagccagccgctgtttctcttggagaaagggttgcagattcctcgttgtcaagc
agcttacctgctgttgaaaaggggagcactgtacagcagccaaaacctggaactgaatct
ttaacatccaagtcgttatcagctgcagctaaacattccagggtggttccagcaactaac
ttggatgaaagcctgccatctaactctgtatcctctgccccagctgccacatctgaggag
tctatgctagtcattgccagtaacgaaggcaggaaggagagtttggttaagtccatctct
ataaaagatcatcagaagaaaatgagcaagaaaggacttattcagccaacaaatcagtct
acatcagcaaccggtgtggcttcccacactgcagagcacggtatttcctccggcagtgca
gtttctgaaactattgaggctaaaacagctctaacatcatcatcagctgttaaggatgat
tcagctccttccgtggagctgaagacagaaaccaagagagaaggcttaacctctgtttca
tctgatgtttctggtactggaagtaatgttgatagcttgaacatggttcaggatgagcaa
ctgaaacctgaaactagtggaattaagggtgaagaaggaaaaactttacttgaagagcac
ttaacagataatgctactcttgagatttcttctcaaccagctcccctgaactctaaggag
cttaagtctaataagggacctgccttgaaggcaatagctaccagcaatgttccaacctca
ggaacttcacagaaggttctgactgaagatgtagggggtaacttagaaaatgagagagtc
actgatagtagggatgtctctccctctagaactgctgaaactacagattttaaaggttct
cacgttgataataccattgcttctgctgctggtagcaatgaaatcactgttactaaatct
tttgcatcagaccagcagtttgatcctgtcctagctgttgatctctcagaaccaacttca
aaatacgaaagggaaggtgttcaggtgcctagttcaaacaaaactgtgccagaagtcggt
aggacaaaaagtaatacaactagagggaagaaaaaaagaaaagaaattcttcagaaagca
gatgctgctgggacaacttctgatctctatatggcatataaaggccctgaggagaagaaa
gagacagtagcaagtgcagaaagcaattctgtcggtcttaatttgaagcagacatctcgt
gagacccctcatgcagatgccatagaaagtgagaaaattgcatacaaaaaagctgaacca
gatgattgggaagatgctgctgatatctctacaacaaaattaggaacttcagataatggt
gaaaaggctcatggaaggcttgggaatcatgagaaagatggaagtagaaatatagcaaag
aagtattccagagatttcctgcttaagtttgcagaaaagtgtactgatcttccaaatgga
tttgagattgcttctgatattgtagaggccttgatggttaccaataccaattccaatgct
tctcactttgttgagcgtgattcatacggtagttcgggaagaataatggatagacaattc
agtggatctcgacaagattgccgtgctggtggaatggctgatgatgacagatggattaga
caatctggttcttttggccctggaagggatttgcgccttgatcttggttatggtgctgct
gcaggttttcggcctggtcaaggaggaaactttggtgttcttcggcacccacgtgggcaa
gcacctctgacatatgttggagggatccttgctggcccaatgcaacctatgggtccacaa
ggaggtatggcacgcaataatcctgattcagacagatggcagcgagcttctaactatcag
caaaaggggttgattccttctccacaaactcctttgcagatgatgcacaaagctgaaagg
aagtatgaagtgggtataataactgatgaggaagaatccaagcaaagacaattgaaagcc
attttgaacaaactaactccacaaaactttgagaagctctttgagcaggtaaaagcagta
aacattgacaacgcagttacactcactggtgttatctcacagatctttgacaaagctttg
atggagcctactttctgtgaaatgtatgcgaacttctgttatcatctggcaggagagtta
cctgattttagtgaagacaatgaaaagataactttcaagagattgctactgaacaagtgc
caagaggaatttgagagaggagagagagagcaagaagaagcaaataaagttgaggaagag
ggtgaggctaagcagtctgaagaggaaagagaggagaagagaataaaggcacgaagacga
atgttaggtaacattagacttattggggagttgtacaagaagaaaatgttaactgagaga
ataatgcatgaatgcatcaagaaactacttggtgagtatgagaatcctgatgaggaagat
gttgaggcattgtgcaaattaatgagtacgattggagacatgattgaccatccaaaagca
aaggtgcatatggatgcttattttgaaaggatgacaaagttgtcaaacaatatgaaactg
tcttctagggttagattcatgttgaaggatgccattgacctgagaaagaataaatggcaa
cagaggaggaaagttgaaggacctaaaaagattgaggaagtgcatcgagatgctgctcaa
gagcgccaagcacaaaccagtaggcttgctcgtggtcctggcatcaatgctggtacaaga
agagcacccatggattttgctccacgagggtctatgttatcttcccttggctctcagatg
ggtggttttagagggccacccacccaagttcgtggacttggtgctcaggatgttcgcatg
gatgacaggcagtcttttgaggctaggactgtgtcagttcccttgcctcaaagaccaatg
ggtgatgattctattactttgggcccccagggaggtcttgctagaggaatgtcttttaga
ggaccaccaggggtatccagtgctcccttagctgatgttcctccagcttcaggagattca
agaagagtagccactggtttgaatggttttaatgctccctccgagcgaactacttatggt
tcgagggaggatctgattccaagatatgggacagatagatctgcagtgcctgctacttat
gaccacttgagctcccaggaatgtggcctgaattttggtaataggggtcctgataacagc
tttgatagatcttctgcagcttctgccgcaggccaaagatccagtttcactcaaaatgtt
cccccagaaaagggctggtctgaggagcgtctgcatgatatgtctatggcagcaattaaa
gaattttacagtgctagagatgagaaagaagttgctttgtgcatcaaagacttgaattct
ccgagcttccatccctcaatgattgctctttttgtaacggattctttcgagagaaaagat
gttgaacgtgatctgttggccaagctacttgtgaatctgacaaagtctcatgatggtgtg
ctgagccaagttcaacttgttaaagggtttgaatctgttctcagcacattggaggacgct
gtaaatgatgctccaaaagctgcagaatttcttggtcaaatctttgccaaactggtaatg
gaaaatgtgatatccctgaaggaaatcgggcatttaatacatgagggtggggaggagcta
gggcgtcttctggaaattggacttgccggggacgttcttggaagcacactgggagcaatt
aaagcagagaaaggagaaagtgtgtttaatgaaattcgagcaagctctgatttgcgactg
gaggactttcggccaccagatcctaaaaaatcaaggttattagaaacttttctttag
DBGET
integrated database retrieval system
