Gossypium hirsutum (upland cotton): 107900822
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Entry
107900822 CDS
T04793
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107900822
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107900822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
SCIMP
Motif
Other DBs
NCBI-GeneID:
107900822
NCBI-ProteinID:
XP_016682031
UniProt:
A0A1U8IVC4
LinkDB
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Position
D08:52203003..52209410
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AA seq
869 aa
AA seq
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MNYEQRLKAAAKIVLTYDERAGDDAVDCVEFGVTATLKPHQVDGVSWLVRRYVLGVNVVL
GDEMGLGKTLQAISFLSYLKVHQKSPGSFLVLCPLSVTDGWVSEIVKFTPKLEVLRYVGD
KEHRRSLRKNIYEHVKEKSSSNVPSLPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQR
LKNPSSVLYNVLNDRFIMPRRLLMTGTPIQNNLTELWALMHFCMPSVFGTLNQFLSLFKE
AGDISSDSTSSKSKELFKSLKYILQAFMLRRTKAKLIESGNLVLPPLTEITVMAPLVSLQ
KKVYTSILRKELPKLLALSSCSCSHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLV
QGSGKLMVLDQLLWKLYDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERF
AAIRSFSKQSAEGSVNSESDQTAAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQ
ALQRAHRIGQMNHVLSINLVTEYSVEQVIMRRAERKLQLSHNVVGDHVMDQEGKEMEGAE
MGDLRSIIFGLHMFDPTQINNEEAYELKTSELSAMAEKVIAMRYEQMLGKNDGKFEINAG
DLMDGHDVHMRESSVSNDPGLDEASYLSWVEKFKVASQSGDNQIMALESRRNFPEDRHLK
VEAAKKKAEEKKAAKWEANGYHSLSVQDPCPMDGDMLSDSGSVFFVYGNCTDPSKVCPSE
PAIIFSCIDNSGNWGHGGMFDALAKLSASVPVAYERASEFQDLHLGDLHLIRVNEDVKEN
NTPLWVALAVVQSYNPRRKVPRSDITMPDLERCLSKASFSAAENSASIHMPRIGYQDRSD
RSQWYTVERLLRKYASIYGVKIFVYYYRR
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgaacagaggcttaaagccgcggccaaaatcgtcctcacgtacgacgaacga
gctggagacgatgcggtggattgtgtagaatttggagtcaccgcgacgctgaaacctcac
caagtcgacggagtgtcttggcttgttaggagatatgttcttggcgtcaacgtcgttctt
ggggatgagatgggattggggaagactcttcaagctatttccttcttgagctatttgaag
gtccatcagaagtcacctgggtcatttttggtgctttgtcccttaagtgtaacggacggt
tgggtgtcagagatagttaaatttactcctaaattagaagttcttaggtatgtcggtgac
aaagaacaccggcgaagtctacgcaagaatatatatgagcacgtgaaagagaagtcatca
tcaaatgttccatccttaccctttgatgtgctcttgacaacatatgacatagcattgatc
gatcaagattttctctctcaaataccctggcattatgctgtaatagatgaagctcaaagg
cttaaaaatccttccagcgttctgtataatgtccttaacgataggtttattatgccaaga
cggttgttgatgactggtactcctattcagaacaatctcactgaactctgggctttgatg
cacttttgtatgccctcagtgtttgggaccctaaaccagtttctttctttattcaaagaa
gctggagatatttcatcagatagtacatcatctaagtccaaggagttgtttaagagttta
aagtatatattgcaagcttttatgcttcgacggacaaaagctaaacttattgagtctgga
aatctagtactcccgcctcttactgagattactgtgatggctccattagttagcctgcaa
aagaaggtgtatacttcaatattaagaaaggagcttccaaaacttcttgctttgtcttct
tgctcatgtagccatcaatctttacaaaatattgtaattcaactaagaaaagcatgtagc
cacccttacctcttccctggcattgagcctgagccatatgaagagggtgaacaccttgtt
cagggcagtgggaagcttatggttttagatcaactactctggaagctatatgattctggg
catcgtgtccttctctttgctcagatgacacatacgcttgacattttacaggatttttta
gagttacgaaagtattcctatgagcggcttgatggatcaattcgagctgaagagcggttt
gctgcaataagaagtttcagcaagcaatcagctgaagggagtgtgaattcagaatctgac
caaactgctgcttttgttttcttgatctctacgagagctgggggtgttggcttgaatctt
gtagctgctgatacggttatattctacgagcaagactggaatcctcaggtagacaagcag
gctcttcagcgagcacatagaataggccaaatgaatcatgtgttgtccataaaccttgtt
acggaatatagtgtggaacaggtaattatgcggagagcagaaaggaagctgcaacttagt
cataatgttgtaggagatcatgtcatggaccaggaggggaaagaaatggaaggagctgaa
atgggtgatttgcgatctatcatatttggattgcatatgttcgatcctactcagatcaat
aatgaagaagcatatgagttaaagacatccgagctaagtgctatggctgagaaagtaatt
gcaatgcgttatgaacaaatgttaggcaagaatgatggcaagtttgagattaatgcaggg
gatttgatggatggccatgatgttcatatgagagagagttccgtcagcaatgatcctggt
cttgatgaggcttcatacctttcttgggttgaaaaattcaaggtagcttcacagtcgggt
gataatcaaatcatggcattggaaagtagaaggaactttcctgaggacaggcatctgaaa
gttgaggctgcaaagaagaaggcggaggaaaagaaggcggctaagtgggaagctaatgga
taccattcactgtctgtccaagatccttgtccaatggatggtgatatgctgtcagattct
ggttctgttttttttgtttatggcaattgtactgatccatcaaaagtttgtccctctgag
cctgctataatattcagttgtattgataattctggaaactggggtcatggtggaatgttt
gatgctctagcgaagctttctgctagtgttcctgttgcatatgaacgagcatccgagttt
caggaccttcatctcggtgatcttcatcttataagagtcaatgaggatgtcaaggaaaat
aatacaccattatgggttgctttggctgttgttcaatcttataatccaagacgtaaagtt
cctcgtagtgacatcactatgcctgatctggaacgttgtttgtcaaaggcatcattctca
gcagctgaaaattctgcttcaatccacatgccacgaattggatatcaagatcgatcagat
cgttctcagtggtacaccgtggaacgtcttctgagaaaatatgcttccatttatggtgta
aagatctttgtgtattattaccgtcggtaa
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