Gossypium hirsutum (upland cotton): 107900908
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Entry
107900908 CDS
T04793
Name
(RefSeq) flap endonuclease GEN-like 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107900908
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107900908
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
107900908
NCBI-ProteinID:
XP_016682174
UniProt:
A0A1U8J1S1
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Position
D08:50585639..50588901
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AA seq
611 aa
AA seq
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MGVGGKFWELLKPYARFEGFDFLRDKKVAIDLSFWIVQQETALKNQALNPHLRLTFFRTV
NLFSKFGVFPVFVLDGTPSPLKSQARMVRFFRFSGIDTSTSNVAEEGVSKERNSAFKRCV
NDCVELLELLGMPVLKANGEAEALCAQLNRDGHVDACITADSDAFLFGATCVIKSLRPNS
KEPFECYNMSDIEAGLGLKRKHLIAVSLLVGNDHDLNGVQGIGLDKALRLVRGFSEDEIF
DKLYEIGKGHVPLFQGEIRCAGDAIPCSDESSPKAKQSHCSFCGHPGSKKAHFKSCCEYC
ITDSNDGCLKKSQGFKCNCSSCDKVRKDKDKKKHENWWINVCNLISKETKFPNDEIIEMY
MCNNHGEFTEEGPLLEWGDPKTDLLVDFLAYHQSWKPSYIRQRMLPMLSTLYLRELARNP
NKTLLVGQYEFRSIQRVKIRYGHQYYEVKWKKAISNELSCAVPVEQSNMLEEEFIEVGDE
PIGLLDESIEPQIHVDGCWILTDENPELVHSAFPEEALKFRQEKELKDMKRRKTSTPRSE
GSFEMSESSKPQGVQLSITEFYRTTKTPSQAKLGEDLVKQSSSPGVGSSKQKRKVSGSKL
SKAVRRRLLFG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgggaggcaaattctgggaacttctaaaaccctacgctcgattcgaaggattc
gatttcttgagagacaaaaaggtcgccattgatctctccttttggatcgttcagcaggag
actgccttaaaaaatcaagctttgaaccctcatctcaggcttactttcttccgtaccgtt
aaccttttctctaagtttggagtctttccggtgtttgttttggacggaactccgtcgccg
ttgaaatctcaagcaaggatggttcggtttttccgtttctccggcattgatacttcaact
tcgaatgtggccgaagagggtgtttccaaggagaggaactcggcatttaaaagatgtgtt
aatgactgtgtggagctgcttgaactattgggaatgccagtgttgaaagctaatggtgag
gctgaagcattgtgtgctcagttaaatagagatggtcatgttgatgcttgtattactgct
gacagtgatgcattcctctttggggctacttgtgttattaaaagtcttaggcctaattca
aaagaaccgtttgaatgctacaatatgtcggatattgaagctggtcttggactgaagagg
aaacacttgatagccgtctctcttttggttggaaatgaccatgacctaaatggtgtgcaa
gggatcgggcttgataaagcacttcgtttggtacgagggtttagtgaagatgagatattt
gataaattatatgaaataggcaaagggcatgtaccactatttcagggtgaaattagatgt
gctggtgatgctataccttgttcagatgagagctcaccaaaggcaaagcagtctcattgc
tctttctgcgggcaccctggcagcaaaaaggctcattttaagtcttgttgtgaatattgt
atcactgatagcaatgatggttgcttgaaaaagtctcaagggtttaagtgcaactgctca
tcctgtgataaggttagaaaagacaaggacaagaagaaacatgagaattggtggattaat
gtttgcaacttgatttccaaggaaacaaaattcccaaatgatgagatcattgaaatgtac
atgtgcaacaatcacggagagtttactgaagaaggccctttgctggaatggggagatcca
aaaactgacttgctagttgatttcttagcttatcatcagtcatggaagccgtcttatatt
cggcagcggatgcttccaatgctgtccactctgtatttgagagagttggcgagaaatcca
aataaaactttgttagttgggcagtatgagtttcgttctattcaacgtgtgaagataaga
tatgggcatcaatattacgaggtcaagtggaagaaagccatatctaacgaacttagttgt
gcagtccctgttgaacagtccaacatgcttgaagaagaattcatagaagttggtgatgag
cccattggcctgttggatgagtcaattgagccccagattcatgttgatggatgctggatt
ttaactgatgaaaatccagagttagttcattcagcttttccagaagaagctctcaaattt
agacaggaaaaggaactaaaagatatgaagagaagaaagacttcaacaccaagatctgaa
gggtccttcgagatgtcagaatcatcaaagccacaaggtgttcaattaagtatcaccgaa
ttttaccgtacaaccaaaacaccatcccaggcaaaactaggggaagatttagtcaaacag
tcgagtagtccaggtgttgggtcatcaaaacagaagaggaaagtttcaggttctaaattg
tccaaggctgtaagacgacgccttttgtttggttaa
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