KEGG   Gossypium hirsutum (upland cotton): 107900946
Entry
107900946         CDS       T04793                                 
Name
(RefSeq) replication stress response regulator SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107900946
   03032 DNA replication proteins [BR:ghi03032]
    107900946
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107900946
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   Complex C specific factors
    107900946
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107900946
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    107900946
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin
Other DBs
NCBI-GeneID: 107900946
NCBI-ProteinID: XP_016682236
UniProt: A0A1U8IVY2
LinkDB
Position
D08:complement(49331255..49333527)
AA seq 449 aa
MEDHQISGDDIDMKDLNPRQLQLFVKLLNGETLSLQFPTLQVQVSDVKHRIQEFTQIPFN
FLRLIRGHQLKDDSVISHSNATLNLSLRLLGGKGGFGSLLRGAATKAGQKKTSNFEACRD
MSGRRLRHVNAEKRLEEWKAEEEQRKLEKIAEDFIKKKAKTGKKGVGDGEAEKYVAKYRE
QSARCVAVAVVEESVRAACQNGKRKTVPGGADPKRLKIWMGKRKVDESDSDSDYSSEDED
NEENEKSVILNNGNHSDSSKGAEGSSGSVLGGKQDIDFSSGVSSDTGSEEEKEVVLHRSS
ESCEDVNAMVEADVIAGSEAAHPEMPEQNGTKTENQEEIVSQCLSAPVAENGVGSELIDE
VNCSSILKPEVHKDALVSNVNATEPENPLNFDDFYSSAEMEVLGLERLKSELQSRGLKCG
GTLQERAARLFLLKSTPLDKLPKKLLAKK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaagatcatcaaatcagcggagacgatatcgacatgaaggacctgaacccaaggcag
ttacagctgttcgttaaacttctcaatggtgaaactttgtcgctccaattcccgaccctt
caagtccaagtcagcgatgtcaagcaccgaattcaggaatttacccaaatccctttcaat
ttcctgcgactgattcgcggccatcaactcaaggacgattcggtgatttcccactccaac
gctaccctcaacctttccctccggctcctcggtggcaaaggaggtttcgggtcgctgctg
cgtggcgcagccacaaaagccgggcagaaaaagacaagcaatttcgaggcgtgccgagac
atgagcggaaggaggctaaggcatgtgaatgctgagaagaggttggaggagtggaaagcg
gaggaagaacagagaaagttggagaagatcgcggaagacttcataaagaagaaagcaaaa
actgggaaaaaaggagttggagatggagaggccgagaagtatgtagcgaagtacagagag
cagtcggcgaggtgcgtggcagtggcagtggttgaagagtccgttagggcggcgtgccaa
aatggaaaacggaagacagtgccgggaggagctgaccccaaaagattgaagatttggatg
ggaaagaggaaagtggatgagagtgatagtgacagtgattatagcagtgaggatgaagat
aatgaggaaaatgagaaatctgtaattttgaacaatgggaatcattcagattctagtaag
ggagctgaggggagttctggttcagttttggggggaaaacaggatatagacttttcaagt
ggagtctcaagtgatactggttctgaggaagagaaggaggttgttctgcatcgaagctcg
gaatcttgtgaagatgttaatgccatggttgaagcagatgtgattgctgggagtgaagca
gctcatcctgagatgccagaacaaaatggaactaaaactgaaaatcaagaggaaatagtt
agtcaatgtctcagtgctccggttgcggaaaatggagttggaagtgaattgattgatgaa
gtcaattgttcttctatcctaaaaccagaagttcacaaagacgcattagtttcaaatgtt
aatgctacagaaccagaaaatccattgaactttgatgatttttattcttctgcagagatg
gaggttcttggattggagcggttgaaatctgaactacagtcacgtgggctaaaatgtggg
ggtactttgcaagagcgagctgctcgtctgtttctgctaaaatctacccctttagataag
cttccaaagaaactgcttgcgaagaagtga

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