Gossypium hirsutum (upland cotton): 107901112
Help
Entry
107901112 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107901112
03083 Polycomb repressive complex
107901112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107901112
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107901112
Histone modification proteins
HAT complexes
HATB complex
107901112
HDAC complexes
Sin3A-HDAC complex
107901112
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107901112
PRC2.2
107901112
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107901112
Heterochromatin formation proteins
Other heterochromatin formation proteins
107901112
Chromatin remodeling factors
NuRD complex
107901112
NuRF complex
107901112
NuRF complex (fruit fly)
107901112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107901112
NCBI-ProteinID:
XP_040951655
LinkDB
All DBs
Position
D06:complement(13370180..13376145)
Genome browser
AA seq
489 aa
AA seq
DB search
MESSQPQQQQGPKKRGRKPKPKDEKEQQQQQQSAGKMKEGKKAQQPSVDEKYTQWKSLVP
VLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPR
VAAAEHISQFNEEARSPFVKKYKTLIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEA
QPNRHAVLGATHSRPDLILTGHQDNAEFALAMCPTEPYVISGGKDKSVVLWSIQDHISGG
SIVKQNKPGEGNDKTAEGPSVGPRGIFCGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWD
ARVGTGPTIKVEKAHDADLHCVDWXPHDDNLILTGSADNTVRMFDRRNLTSNGVGSPIYK
FEGHRAAVLCVQWSPDESSVFGSSAEDGLLNIWDYDKVGKKVERPSKSPSTPAGLFFQHA
GHRDKVVDFHWNASDPWTVVSVSDDCDSTGGGGTLQIWRMSDLIYRPEEEVLAELEKFKS
HVISCASKP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagtcttcccaaccccaacagcaacaagggcccaagaagagaggccgaaaaccgaag
ccgaaggacgagaaagaacagcagcaacagcaacaaagtgcgggtaaaatgaaagaagga
aagaaagcccaacaaccaagcgttgatgagaagtacactcaatggaagtctttggtccct
gttctctatgactggcttgctaatcacaatctcgtttggccttctctctcttgccgctgg
ggaccgcagcttgagcaagctacctacaagaatcgacagcgtctctacctctcagagcag
acggatggtagtgttccaaatacgcttgtgattgcaaattgtgaagttgtcaaacctagg
gttgctgctgctgaacacatatctcagtttaatgaagaagcacgctcaccatttgtgaag
aagtacaagacccttatacatcctggagaggtgaacagaattagagaacttccacagaac
tctaagattgttgccacacacactgatagtccagatgttcttatttgggatgttgaagct
caacccaaccgtcatgctgtccttggagctacacattctcgcccagatttgattttgact
ggacatcaagataatgctgaatttgctctcgcaatgtgtcccaccgaaccctatgtgatc
tctggagggaaggacaaatcagtggtattgtggagtatccaggaccacatatctggtgga
tcgattgtcaaacagaacaagcctggggaaggtaatgataaaacagctgaaggaccttct
gtaggtcctcgtggtatcttctgtgggcatgaggataccgttgaagatgttgcattctgt
ccatccagtgcacaggagttttgtagtgtaggcgatgattcctgcctcatattatgggat
gcacgagttggcactggccccactatcaaggttgaaaaggcacatgatgctgatcttcat
tgtgttgattggnaaccccatgatgataatcttatcttgactgggtctgcagataatact
gttcgtatgtttgatcgaagaaatctcacttctaatggagttggatcaccaatttataag
tttgagggtcatagagctgctgttctgtgtgtgcagtggtcaccagatgagtcatctgta
tttggtagttcagccgaggatggcctcttaaacatttgggattatgacaaggtgggcaaa
aaggtggaacgtccttcaaaatcgccaagtactcctgcaggactctttttccagcatgct
ggccacagggacaaagtcgtcgacttccattggaatgcatctgatccatggactgttgtt
agtgtatctgatgactgtgatagcactggtggaggagggacattacagatatggcggatg
agtgatctgatctacaggccagaggaggaggttttggcagagctggagaaattcaagtcc
catgtcatttcatgcgcctcaaagccatga
DBGET
integrated database retrieval system
