Gossypium hirsutum (upland cotton): 107901208
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Entry
107901208 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107901208
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107901208
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107901208
03036 Chromosome and associated proteins [BR:
ghi03036
]
107901208
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107901208
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107901208
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107901208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
107901208
NCBI-ProteinID:
XP_016682598
UniProt:
A0A1U8IWU4
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All DBs
Position
D06:complement(9728501..9731395)
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AA seq
496 aa
AA seq
DB search
MLKQILIKLPLKLQKSDLLDSSGSDSGNHTSNSGNGVQCANIGNSISSRLSVVKRVSSAV
FPASIMVGVEAVEPYLSFTDVSSLQKQSLFISKLNLCCEVSDFSDPDKTSAEQDLKHQTL
IELVDFVSTGSAKFNEPAIAAMCKMCAVNLFRVFPPKYRSNSISGEVEDEEPMFDPSWSN
LQLVYDLLLGFITYSSLDAKVAKKYVDHSFISRLLDLFDSEDPRERDCLKTILHRIYGKL
MVHRPFVRKAVSNIIYRFVFETERHNGIAELLEIFGSIISGFAVPLKEEHKMFLWKSLIP
LHKPKLVGVYHQQLTFCVVQFIDKDPKLADSVIKGLLKYWPVTNSQKELMFISELEEVLE
MTSMAEFLKIMVPLFRRIAFCLNSSHYQVAERTHLLWNNEHILNLVTHNRQVIFPLIFPA
LERNSENHWNQAVLNLTQSIKKMLCEMDEELVLACRQKMEEENSQSSEATEKRKLIWERL
ETAANVIPSAACPVAC
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacaaattttaatcaaactcccgctgaagttacaaaaatctgacctattagat
tcatctggaagtgattctggaaaccatacttctaactcagggaatggagttcaatgtgca
aatatcgggaatagtatatcaagtcgtctaagtgttgttaaacgggtgtcctcagctgtt
tttcctgctagcatcatggttggtgtggaggcagtagaaccctatttatctttcacagat
gtttcaagtctgcagaaacagagcctctttattagtaaattgaatctgtgctgcgaggtt
tctgatttcagtgatcctgataaaactagcgccgagcaagatcttaaacatcaaacactg
atagaactagttgattttgtttctacggggtctgcaaagttcaatgaaccggcaattgcc
gcaatgtgtaaaatgtgcgccgttaacctgttcagagtttttccacctaaatatcggtct
aatagcattagtggtgaagtggaagatgaagagccaatgtttgatccttcatggtcaaat
ttgcaactcgtatatgatctacttcttgggtttattacgtatagttctcttgatgcaaag
gtggcaaagaagtacgtagatcattcttttatttcgaggttacttgacctctttgattct
gaggacccccgggaaagggactgtttgaaaacaattctgcacagaatttacgggaaactc
atggtgcacaggccctttgtacgaaaagctgttagcaatatcatctatcgttttgttttt
gaaactgaaaggcataatggtattgctgaactcctcgagatattcggaagtattattagt
ggttttgctgtaccattgaaagaggaacacaagatgtttttgtggaaatcccttattcct
ttacacaaaccgaaactggtgggtgtttatcatcagcaattaacattttgtgttgtacag
tttatagataaggatccgaagttagccgatagcgtgattaagggactgttaaaatattgg
ccagttacaaatagccagaaggagttaatgtttattagcgagttggaagaggttttggag
atgactagcatggccgagttcctaaagatcatggttccactgtttcggcgtattgcattt
tgcttaaacagctcccattaccaggtggctgaacgaactcacttgctatggaacaatgag
cacatccttaatcttgtaacacataaccgtcaggtgatatttcctcttatcttccccgcc
ctcgagcgaaattctgagaaccattggaaccaagcagtgcttaacctgacacaaagcata
aagaagatgttgtgcgagatggatgaagaacttgtgcttgcttgccggcagaagatggag
gaggaaaactcccagtcgagtgaggcaactgagaagaggaaactaatatgggaacgcctg
gaaactgctgccaacgtgattccttccgctgcatgcccggttgcctgttga
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