KEGG   Gossypium hirsutum (upland cotton): 107901241
Entry
107901241         CDS       T04793                                 
Name
(RefSeq) pentatricopeptide repeat-containing protein At5g21222
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107901241
   03029 Mitochondrial biogenesis [BR:ghi03029]
    107901241
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    107901241
Mitochondrial biogenesis [BR:ghi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    107901241
SSDB
Motif
Pfam: PPR_2 PPR_1 PPR_3 PPR PPR_long TPR_24 ATP13 MRP-S27 Clathrin Phage_cap_E TPR_ZFYVE26 ERAP1_C
Other DBs
NCBI-GeneID: 107901241
NCBI-ProteinID: XP_016682652
UniProt: A0A1U8IWZ3
LinkDB
Position
D06:11064658..11069044
AA seq 632 aa
MVKSGEETLDSVTNRRSIAMGKHQEGTIMSKKPVKASAVVVSHVDEKEQSHPGTGSADSE
VSSKCIVCSGNNSCQTVRARTKLMNILIEKGKPQEAQFIFNSLTEEGHKPTLVTYTALVS
ALTRLKRYKSIISLISKVEENGMKPDSILFNAMINAFSESGNVKEAMKIFQKMKKSGCKP
TTSTFNTLMKGYGNIGKAEESSKLLELMLQDGNVQPNDRTYNILIRAWCNKLNIEEAWNV
VHIMVASGMHPDVVTYNTIARAYAQTGETYRAEQMIFEMQNNKVAPNVRTCGIIVTGYCK
EGNMTEALRFVYRMKELGVQPNLVVFNSLVKGFLDVTDTNGVDEALTLMEEFGVKPDVIT
FSTIMNAWSSAGLMDKCQEIFDDMVKAGIEPDVHAFSILAKGYIRAGEPGEAESLLNSMG
KFGVQPNVVIFTTVISGWCTAGKMNHAARVYEKMCEIGITPNLTTYETLIWGYGEAKQPW
KAEELLQIMEEKGISAERSTIQLVADAWRAIGLLNEARRIIKNVDRGIASNTKDDIPAEG
MEKTYKKQSLSASYSNVLQMPGVAMNEQNGSSSSKARSQMVLKKYDSSSLFPAQASVFGV
QPGIICQKQLTTTREYRMHGQFVNSCKLVFIN
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggtgaaaagcggagaagaaacattggacagtgtgaccaacaggaggtccattgccatg
ggtaagcatcaggagggaacaatcatgagcaagaagccagtcaaagcttcagcagttgtg
gtatcacatgttgatgagaaggaacaatcacatccaggtacaggttctgcagattctgaa
gttagctccaaatgcattgtttgctcaggaaacaacagttgccagactgttcgtgcaaga
acaaaactaatgaacattttgattgagaaggggaagcctcaagaagctcaatttattttc
aacagcttaacagaagaaggacataaaccaactcttgtgacctacacggctcttgtgtct
gcattaacccgcctgaaacgttacaagtccattatttcacttatctccaaagtggaagag
aatggcatgaagcctgattctattctcttcaatgctatgatcaatgccttttcagagtct
ggaaatgtgaaagaagcaatgaaaatctttcagaaaatgaagaagagtggatgtaagcct
acaaccagtacttttaatacccttatgaaaggatatggaaatattggaaaggctgaagag
tcttcaaaattactagagttaatgttgcaggatggaaatgtccaaccaaatgatagaaca
tacaacattctaattagagcatggtgcaacaaactgaacatagaagaagcatggaatgtg
gtgcatataatggtagcatctggtatgcatcctgatgttgtcacttacaatacaatagca
agagcctatgctcagaccggggagacttatagggcagaacagatgatatttgagatgcaa
aacaacaaagtggctcccaatgtgcgtacttgcggtatcattgtgaccggatattgtaaa
gaaggtaatatgacagaagctttgaggtttgtgtacaggatgaaggagctaggagttcaa
ccaaatcttgttgttttcaactctctggtaaaaggttttctagatgttacagatacaaac
ggagttgatgaggcactaacactgatggaagaattcggggtcaaaccagatgttataaca
tttagtacgattatgaatgcctggagctcagcagggctgatggacaaatgccaggagatc
tttgatgatatggtaaaggctggtatagaacctgatgtccacgcatttagcatcctggcg
aaaggttatattcgtgctggggagccaggagaggctgagtcactcctcaactccatgggc
aaattcggtgtgcaaccaaatgttgtaatcttcacaactgtcattagtgggtggtgcact
gctggaaaaatgaatcatgcagccagagtttatgagaaaatgtgtgaaatcggcattacc
cccaatttgactacttatgagacactgatatggggatatggggaagcaaaacagccatgg
aaagctgaagaactcctgcagattatggaagagaagggtatctctgctgagaggagcacc
atacagctagtagcggatgcttggcgtgccatcggtttactaaatgaagcaagaagaatc
ataaaaaatgtagatcgaggaattgcatcgaatactaaagatgacataccggcagagggc
atggagaagacgtacaagaaacaaagcctaagtgcttcttattctaatgttttgcagatg
cctggggtagccatgaatgaacaaaatggatcatctagttccaaagcaagaagccaaatg
gtgttgaagaaatacgattcatcatctctgtttcctgctcaagcaagtgtttttggggtg
caaccagggattatatgccagaagcagttaacaacaaccagggaatataggatgcatggg
cagtttgtaaattcatgtaaattggtgttcataaactga

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