Gossypium hirsutum (upland cotton): 107901256
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Entry
107901256 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: polyprotein of EF-Ts, chloroplastic
KO
K02357
elongation factor Ts
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ghi03012
]
107901256
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107901256
Translation factors [BR:
ghi03012
]
Eukaryotic type
Elongation factors
107901256
Prokaryotic type
107901256
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
107901256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
DUF6742
CsrA
Motif
Other DBs
NCBI-GeneID:
107901256
NCBI-ProteinID:
XP_016682671
UniProt:
A0A1U8IX72
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All DBs
Position
D06:complement(11372157..11377849)
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AA seq
1081 aa
AA seq
DB search
MTPVIPCSVSNITFIPGAACTVRKNTSLTRCSSSRKHTRYALPSQRFILPLSTSVTSFRK
YGTGYALHGKLGICLSTAGTDVAVEESDSSVTKVSSGGSEIPSDAVETSEDTTSQPDSTP
PTQSKRARPVRKSEMPPVKNEELIPGAMFTGKVRSIQPFGAFVDFGAFTDGLVHVSRLSN
SFVKDVASVVSVGQEVQVRLVEVNTESGRISLSMRENDDASKRLPRKDGPASTDKARSSR
KNASKXQLKKDFKSSKFVKGQELDGTVKNLTRSGAFISLPEGEEGFLPQSEEADDGLMSM
MGNSSLQIGQEVKVHVLRITRGQVTLTMKKEEDDDKLDSQLSQGVVYAATNPFMLAFRKN
KEIAAFLDQREKAEKVEVQPAANVETTTVSTAVDETVVKETDAIAEIANKDEETAEKETD
DSFEELSPESGGQVPLAGVVESDEIAGSSGEVVDQVTSEYSVDEESTQKDVVQEEAPLAE
DETSVAASVQEEEIGSIPEEQAETPLAEDKTPSAASVQEEEIGAVPDENGNVASSVVQPD
VTDPKDAEDTVENEASPDPPQESADDLIKSSGSEAVEEVENQPKDTKDEVQIETPVSKDE
IPSTSEVEEADSAPQKNDEVTDSNGSMSKENVTTAATISPALVKQLREETGAGMMDCKKA
LAETGGDIVKAQEFLRKKGLASAEKKSSRVTAEGRIGSYIHDSRIGILVEVNCETDFVSR
GDIFKELVDDLAMQVAACPQVQYLVPEDVPEEIVNKEREIEMQKEDLLSKPEQIRSKIVE
GRIQKRIDELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRFNLGEGLEKKSQD
FAAEVAAQTATKPVTTAGKEQSTSVEVKETDEKPKPAVSAALVKQLREETGAGMMDCKKA
LSETGGDLEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDSRIGVLIEVNCETDFVGR
SEKFKELVDDLAMQVVASPQVQFVSIEDIPESIVSKEKELEMQRDDLASKPENIREKIVE
GRVSKRLGELALLEQPFIKDDSLLVKDLVKQTVAALGENIKVRRFVRFTLGETTEDTKTG
N
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtgatcccatgttctgttagcaacattacattcatccctggagctgcctgt
acagtaaggaagaacactagtttgacaagatgcagttcatcaaggaaacacacgagatat
gctttaccctctcagagattcatcctacctctatcaacctctgttacttcatttcgaaaa
tacggaacagggtatgccttacatggaaaactgggaatttgtttatcaaccgcagggact
gatgtggcagtggaggaatccgattcgtctgtgacaaaagtttccagtggaggatccgaa
ataccttcagatgcagttgaaacaagtgaagatacgactagccaaccagattctactcct
ccaactcaatcaaaacgagcaagacctgttaggaaaagtgagatgccacctgtaaagaat
gaggagcttattcctggtgcaatgtttactgggaaagtaagatcaatccaaccatttggt
gcttttgttgattttggagctttcacagatggactggtgcatgtttccaggttgagcaac
agctttgttaaggatgttgcaagtgttgtttctgttggacaagaggtgcaggtgaggtta
gttgaagtaaacactgagagtgggaggatatctctttccatgcgtgaaaatgatgatgct
agtaagcgcctgccacggaaagatggtcctgccagtactgataaggcaaggtcttccagg
aagaatgcttcaaagntccagctcaaaaaagatttcaaaagctcaaaattcgtcaaggga
caagaactagatggcacggtaaagaatttaactaggtctggtgctttcatatctctccct
gagggggaagaaggattcttgccccaatcagaagaagctgatgacggacttatgagcatg
atggggaactcatcactgcaaattggccaagaagtcaaagttcatgtgctgcgcattaca
aggggacaggtaaccttgacaatgaagaaagaagaggatgatgacaaattggactcacag
cttagccaaggtgtggtgtacgctgcaacaaatccctttatgctggctttccgtaagaat
aaggagattgctgcatttttggatcagagagaaaaggcagagaaagtagaggttcaaccg
gcagctaatgtggagacaaccactgtctctactgcagtggatgaaacagtggtaaaggaa
acagatgcaatagctgagattgcgaacaaggatgaggaaactgcagagaaggaaacagat
gacagttttgaagagttgtctcctgaaagtggtggacaagttcctttggcgggtgtggtg
gaaagtgatgaaatagctggatcatctggagaagtagttgaccaagtgacttccgaatat
tcagttgatgaagagtctacacaaaaagatgtagtacaagaggaagctcccctagctgag
gatgaaacatcggttgctgcatcagttcaggaggaagaaatcggaagtattcctgaagag
caggcagaaacacctctagctgaggataaaactccctctgctgcatctgttcaagaagaa
gaaattggagctgttccggatgaaaatggcaatgttgccagttcagttgtacaaccagat
gttactgatcccaaagatgccgaagatacagtggaaaacgaggcaagtcctgatccacct
caagaatcagctgatgatctgattaagtcttcaggaagtgaagcagttgaagaagtagaa
aatcaacccaaggataccaaggatgaagtgcaaatagagacaccagtttctaaggatgaa
attccttctacttctgaagttgaagaagcagactctgcacctcaaaagaacgacgaggtt
actgattcaaatggctctatgtccaaggaaaatgtgactacagcagcaactatatcaccg
gctctagtaaagcagctccgtgaagaaaccggagcgggaatgatggattgcaagaaagca
cttgcagagactggaggggatattgttaaagctcaggagtttctccgcaagaaaggcttg
gcaagtgcggaaaaaaaatctagccgagtcactgctgaaggaagaataggttcttacatt
cacgatagcaggattggtatcctagtagaggttaactgcgagacagatttcgtctcacgg
ggtgacatttttaaggagcttgttgatgatctagccatgcaggttgctgcttgccctcaa
gtacaatatcttgttccagaagatgttcctgaggagattgtaaacaaagaaagagaaata
gagatgcaaaaggaagatctcttatctaaaccggaacagattagatcaaagattgttgaa
ggacggatacagaagagaattgacgagttggctttacttgagcaaccctacattaagaat
gacaagatggtggtgaaagattgggtaaagcagactattgcaaccattggagagaacata
aaagtgaaaagatttgtgaggttcaatcttggagaggggctggagaagaaaagtcaggat
tttgctgctgaagtggctgcccaaactgccacaaaacccgttactaccgctggaaaagag
caatcaacttcagtggaagtcaaggaaactgatgagaaaccaaaaccagctgtctctgcc
gcacttgttaaacaactacgtgaagaaacaggagccgggatgatggactgcaagaaagct
ctgtctgaaaccggaggtgatcttgagaaggctcaggaataccttagaaagaagggccta
tcaactgctgacaagaaatccagccggctcgctgctgaaggcagaattggttcctacatt
catgactcgaggattggtgtactaattgaagtcaactgtgagaccgactttgttggtaga
agtgaaaagttcaaggagttggttgatgacctagcaatgcaagttgtggccagtccacaa
gtgcagtttgtatccattgaagacattccagagagtatcgtgagtaaagaaaaagagctg
gagatgcaaagagatgatctcgcatctaaaccagagaacattagagagaaaatagtggaa
ggcagagtttcaaagaggcttggagagcttgcccttttggaacaacccttcattaaggat
gacagtctgctggttaaagacttggtaaagcaaactgttgcagcacttggagagaacata
aaagtccgaaggtttgttcgatttacacttggagagacaactgaagataccaaaacaggt
aactga
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integrated database retrieval system
