Gossypium hirsutum (upland cotton): 107901321
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Entry
107901321 CDS
T04793
Name
(RefSeq) TBC1 domain family member 17 isoform X2
KO
K20168
TBC1 domain family member 15
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107901321
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
107901321
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
Viral_NABP
Cullin_binding
Motif
Other DBs
NCBI-GeneID:
107901321
NCBI-ProteinID:
XP_016682758
UniProt:
A0A1U8J2B8
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Position
D06:8425288..8436141
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AA seq
653 aa
AA seq
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MQEAELHDLSDDADYAASQQQGSASIMRCDSGKKSSSSEPEGAQIVYLKDNVTIHPTQLA
SERISGRLKLIKQGSSLFMTWIPYKGQSTNARLSEKDRNLYTIRAVPFADVRSIQRHTPV
LGWQYIIVVLSFGFTFPPLYFYNGGVREFLATVKQHVLLMRSAEDANVFLVNDFQNPLQR
TLSSLELPRAVSIASVPSTPVSVGESSSQQNEERTDVSASVPQYNGRQRQKGHDPARDIS
IQVLEKFSLVTKFARETTSQLFRETHSNGFGPLERRNSNQSALDYSHKSSEYKEDVPVQS
PVDPDPLEFDKLSLVWGKPRQPPLGLEEWATFLDSEGRVVDPKALRKRIFYGGVEHKFRK
EVWAILLGYHSYESTYAEREYQKSIKKTEYETIKNQWQSISPEQAKRFTKFRERKGLIEK
DVVRTDRSLSFYDGDDSPNVNLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESES
FWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDRPLHKYFEQNDCLNYFFCFRWIL
IQFKRELEYEQTMRLWEVLWTHYLSEHLHLYVCVAILKRYRGKIMGEQMDFDTLLKFINE
LSGQIELDAILRDAEALCICAGENGAACIPPGTVPSLPVDNGLFYSQQDDEVL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagcagagcttcacgatttatcagacgatgccgattacgcagcgtctcaacaa
caaggatcagcgagtataatgcggtgcgacagtgggaaaaaaagctcgtcaagtgaaccc
gagggagcccagattgtttatttgaaggataatgttacaattcatcctactcagttggcc
tctgaacggattagtggaagattgaagttaattaagcaaggctcttctctcttcatgaca
tggattccatacaaaggacaaagtacaaatgcaagactatctgagaaagataggaatctt
tataccattagggcagtgccatttgctgatgtcagatccatccagagacacactccagtt
cttgggtggcagtacattattgttgttctgtcatttggatttacatttcctcccctttac
ttctataatggaggagttcgagagttccttgctacagtaaagcaacatgttttactcatg
aggtcagctgaagatgctaatgtatttcttgttaatgactttcaaaatcctctgcagcga
actttgtcttcgttggaactacctagggcagtttccattgctagtgtgccatcaacacct
gtttcagttggggagtcttcttcacaacaaaatgaagagaggactgatgtaagtgctagt
gttcctcaatataatggaaggcagaggcagaaaggtcatgatcctgctcgagatatttca
attcaagttttggagaaattttctcttgtaacgaagtttgcccgggaaacaacttcacag
cttttccgtgagactcatagcaacggttttggtcctttagagaggagaaactctaaccag
tctgcccttgattacagtcacaaatcatctgagtataaagaggatgttcctgttcaaagc
cctgttgatccagatcctcttgagtttgacaaactctcattagtttggggaaaaccccga
caaccacctctggggttggaagagtgggccacattcttggattctgaagggcgagtggtg
gatccaaaagctttaagaaaaagaatattttatggaggagttgaacacaaatttcgaaaa
gaggtctgggcaatattgttgggatatcattcatatgaatcaacgtatgcagagagggag
tatcaaaagtctatcaaaaagacagaatatgaaacaataaaaaaccagtggcagagtatc
tctcctgaacaggcaaaaagatttacaaaatttagagagaggaaaggccttatagagaaa
gatgtggtaaggacagacagatcgctctctttctatgatggggatgacagtccaaatgtg
aatcttttacgtgatattctcttgacctactccttttacaactttgatcttggttactgt
caggggatgagcgatctgctatctccaattttgtttgtgatggaggatgagtcggaatca
ttttggtgttttgtggccctgatggaacgccttgggcctaattttaatcgtgatcaaaac
ggcatgcattctcagctttttgcattatctaagctggtggagttgctagacagacctctg
cacaaatatttcgagcagaatgactgcttgaattatttcttttgtttccgctggattctg
atacagtttaaaagggaacttgaatatgagcaaacaatgcgattgtgggaagtattgtgg
acgcattatttgtcggagcacctccatctgtatgtgtgcgtagctatcttgaagcgctat
cgagggaagataatgggagagcaaatggactttgataccctcttgaagttcatcaatgag
ctgagtgggcagattgagcttgatgcgatcctcagggatgcggaagctttatgtatatgt
gcgggtgagaatggagctgcctgcatcccacctggaactgtaccttctttgccagttgac
aatggtttattctatagtcagcaagatgatgaagtactgtaa
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