Gossypium hirsutum (upland cotton): 107901340
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Entry
107901340 CDS
T04793
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107901340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107901340
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107901340
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107901340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107901340
NCBI-ProteinID:
XP_016682784
UniProt:
A0A1U8J3J8
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Position
D06:7859075..7862605
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AA seq
545 aa
AA seq
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MGFCFWVCFGYSLLFVSLQAVAAAEGDAIVEGTVYIDGKAPIGIIDDDFVCATLDWWPPE
KCDYGTCSWGLAGLLNLDLNNNIFLNAVKAFSPLKIRLGGSLQDKVIYGTDDNQEPCTSF
VKDPSEMFGFTKGCLPMKRWDELNAFFAKAGAKIIVGLNALAGKSIKPGGSAVGAWNYTN
AESFIRYTVEKNYKIHGWELGNELSGNGVGTRIAVNQYAADTAALQRIVQKIYKDVDLKP
LIIAPGGFYESKWFKEFIDKTTTSLDVVTHHIYNLGPGVDTHLIEKILNPSVLDGISGTF
SGLHNVIKSSATKAIAWVGEAGGAYNSGRNLVTNAFVFSFWYLDQLGMASKYDTKTYCRQ
SLIGGNYGLLDTSTFVPNPDYYSALLWHRLMGRNVLSTSFDGTKKIRSYTHCAKQSEGIV
VLFINLDKSTTVQAKLAFNSTMTLRHNHESRTLRIQRMSSKKMIIELPQMVDAEIRREEY
HLRAKDGNLQSRTMLLNGNILSVDSSGNIPPLEPLYVNSAKPITVEPLSIVFIHLSDVIL
PACKV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttgtttttgggtttgttttgggtatagcttgctttttgtaagtttacaagct
gttgctgcagctgaaggggatgcaattgttgagggtactgtttatattgatgggaaagct
cccattggtatcatagatgatgatttcgtttgtgctactttggattggtggcctcctgag
aaatgtgattatggaacatgcagttggggtcttgctggactcctcaatctagatcttaac
aataatatattcttaaatgccgtgaaagctttttcaccattgaagattagattgggaggc
tcattgcaagataaggtcatatatggtacagatgacaatcaggaaccctgtacttcattt
gttaaagacccttctgagatgtttggttttactaaaggatgtttacccatgaaaagatgg
gatgaacttaatgccttctttgcaaaagcaggggctaagattattgttggactaaatgct
cttgctggaaaatctataaagcctggtggttcagctgtaggagcttggaactacaccaat
gcagaatcttttatacgttacaccgttgaaaagaactataaaatccatggttgggagcta
ggaaacgaattgtccgggaatggggttggaactaggatcgcagttaatcagtatgcagct
gatacagcagctctacaaagaatagtgcaaaagatatacaaggatgttgatttgaaaccc
ttgatcatagcacccggtgggttctacgagtcaaaatggttcaaagaattcatcgataaa
acaaccacatccttagatgtagtcactcaccacatatacaatcttgggccaggagtcgat
acccaccttattgaaaagattcttaacccttctgttcttgatggcatctctggaacattc
agcggccttcataacgtcatcaagagttctgcaactaaagcaattgcctgggtgggagag
gcaggaggagcttacaatagcggccgtaatcttgttacaaatgcgtttgtgttcagtttc
tggtatttagatcagctcggcatggcgtcaaagtatgatacaaaaacatactgcagacaa
tcactgattggtggaaattatggtttactagacacctccacctttgtaccaaatccagac
tactatagtgctcttctttggcaccgattaatgggaagaaatgtcctgtctacaagcttt
gatgggaccaaaaagatacgctcttacactcactgtgcaaaacaatcagaaggcatcgtg
gtactatttatcaaccttgacaaaagcactactgtccaagctaaacttgcattcaatagt
acaatgaccttgcgacacaatcacgagtctcggactttgcgcattcagcgcatgtcttct
aaaaaaatgattatcgagctgcctcaaatggttgatgctgaaatcagaagagaggaatac
catctaagagcgaaagatggaaacttacaaagccgaaccatgctactgaatggaaacatt
ttaagtgtggattcatctgggaatatacctcctctggagcctttatatgtaaactcagca
aagccaataacggtcgaacctttatccattgtgttcattcacctgtcggatgttattctc
cctgcttgcaaggtataa
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