Gossypium hirsutum (upland cotton): 107901421
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Entry
107901421 CDS
T04793
Name
(RefSeq) protein transport protein Sec24-like At4g32640
KO
K14007
protein transport protein SEC24
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107901421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107901421
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107901421
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
107901421
NCBI-ProteinID:
XP_016682916
UniProt:
A0A1U8IXX6
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Position
D06:complement(6619373..6633018)
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AA seq
1104 aa
AA seq
DB search
MAAPVSPGAPRPGANSQQPPPPRNVNPNYQTNPNSLADNMQNLNLNRPVSMPNSGPRPSP
FGQQPPFPQSGGSAGFPGALPPMARPGPPPGMMGRPAVPPTGPPQSALPANVPPGRPLGP
PPGHSSPFGSRPPPGSLSSSTGGAVLPSSGFPSSGAPSGGVAPPMPGARPNVFMSSPPLT
GPTGPAAPLSSAPAGPLSNGPPAIVSGALPGAPLFPLAPSASQPPVGPPPTMMSARAPAQ
APTMRSVLGSPAVTSPPVQPMPSASPFSAVPQARPPPPGSPYGSQTWPMQPQQGAQAPPI
PGSTQAQPPRMFGMPQPPTNQAMTTIPPAMGQPGAPLSGPSKIDPNQIPRPIPSSSPIMY
ETRQGNSANPPPPATSDYIVRDTGNCSPRYMRCTINQIPCTADLLTTSSMQLALLVQPMA
LPHPSEDPIQVVDFGESGPVRCSRCKGYINPFMKFIDQGRKFICNLCGFTDETPRDYHCN
LGPDGRRRDADERPELCRGAVEFVASKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACS
AINQVISDLPEGPRTLVGIATFDSTIHFYNLKRALQQPLMLIVPDIQDVYTPLETDVIVQ
LSECRQHLELLLENIPTMFQSSTTAESCFGAAIKASYLAMKSTGGKLLVFQSVMPSVGIG
ALSSREAEGRTNISAGEKEAHKLLLPADKILKTMAIEFAEYQVCVDVFVTTQTYVDIASI
SVIPRTTGGQVYYYYPFSAVSDSAKLYNDLRWNITRPQGFEAVMRVRCSQGIQVQDYSGN
FCKRIPTDIDLPGIDCDKCMLVTLKHDDKLQDGSECAFQCALLYTTVYGQRRIRVTNLSL
PCTNMLSNLFRSADLDTQFACLLKRAAIEIPTSPLVQVREQVTNLCINILFSYRKFCATV
SSSGQLILPEALKLLPLYTLALIKSTGLRNDGRIDDRSFWFNYVSSLSTPLSVPLVYPRM
FAIHNLSTKEEDESVLPPIIPLSSEHVSDDGIYFLENGEDALIYFGSSVDSSILQQLFGF
TSVDEAPSQFVIQQYDNPLSKKFNDVVNVVRRQRCSYLRLTLCKKGDPSGMLFFSCMVED
KNASGPSYVEFLVHIHRQIQMKMS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctgtgtctccaggggcacctagacccggcgccaattcacaacaaccacca
cctccacgaaatgttaatcctaattatcaaaccaatcccaattcgttagctgataacatg
cagaatttgaacctaaatcggccagtttcaatgcccaattctggtccgaggccctcccct
tttggtcaacaacctccctttcctcaatctggaggttcagctggattccccggtgccttg
ccgccaatggcacggcctggtccgccacctggtatgatgggaagacctgcagtgcctcct
actggaccaccgcaatctgctttacctgcaaatgtacccccagggagaccccttggtcca
cctcctggtcactcttccccttttgggtctagacctcctcctggttctctgtcttcttca
acaggtggtgctgttctaccttctagcggtttcccatcttcaggtgcacctagcggtgga
gttgcaccaccaatgccaggtgctcgcccgaatgtttttatgtcatctccacctttgact
ggtccaactggtccagctgcgcccctctctagtgcacctgctggtcctttgagtaatggg
cctccagcaattgtttcgggagctttgcctggtgcacccctgtttcctcttgctccaagt
gcttcacaacctcctgttggacctccaccaactatgatgtcagctagggctcctgctcag
gctccaaccatgcgttctgttttgggaagtccggctgttacttccccaccagttcagcca
atgccttcagcatcaccattttcagctgtgcctcaagctagaccaccacctccaggttct
ccttatggatcacagacttggccgatgcagcctcagcagggagcccaggctcctcctatt
cctggatctactcaagcacaacctccaagaatgtttggaatgccacaaccacctacgaat
caagctatgactaccattccacctgctatgggccaaccgggagcccctttatcagggcca
tcaaagattgatcctaatcaaattccaaggcccattccaagttcctcaccaatcatgtat
gaaactcgtcaaggcaactcggcaaatcctcctccgcctgctactagtgattacattgtc
agagacactgggaattgcagtcctcgttatatgagatgcaccatcaatcagatcccttgc
acagccgaccttttgacaacatcatctatgcagttggctttgttagttcaaccgatggct
cttcctcatccgtcagaggaccctattcaagttgtggattttggggaaagtggtcctgtt
cgatgttcccgttgcaaaggttacataaatcctttcatgaagttcattgatcagggaagg
aagtttatctgcaatttatgtgggtttactgatgaaactcctcgtgactaccactgcaat
cttggtcctgatggcaggcgtagagatgctgatgagaggcctgagctgtgtagaggagca
gttgaatttgttgcttcaaaggagtacatggtccgtgatccaatgccagctgtgtacttt
ttcctaattgatgtatccatgaatgccatacagactggtgctactgctgccgcttgcagt
gccattaatcaagtcatttctgatcttccagaaggtcctcgaactctggtgggaatagca
acatttgactcaacaatccatttttataatttaaaacgggccctacaacagccattgatg
cttattgttcctgacatacaagacgtctatacccctcttgaaacagatgttatcgtccag
ctttctgagtgccgccagcatttagaactattgcttgaaaacatcccaacaatgtttcag
agtagtacaactgctgagtcatgttttggtgctgcaatcaaggcttcatacttggccatg
aaaagtactggggggaagcttctagtatttcagtcagtcatgccgtctgttggcattggt
gccctttcttctagagaggctgaaggaagaactaacatatctgctggagaaaaggaggct
cataaattacttcttccagcggacaaaattctcaagacaatggcaattgaatttgctgag
tatcaggtttgtgttgacgtatttgtcactactcaaacttatgtcgacattgcttccatc
tccgttataccaagaacaactggaggccaggtgtattattattaccccttctctgcagta
tctgattctgcaaagctctacaatgaccttagatggaacatcaccaggccccaaggtttt
gaggctgtaatgcgcgtgagatgcagccagggtattcaagttcaagattactctggaaac
ttttgcaaacgcattccgaccgacattgacctacctgggattgactgtgacaaatgtatg
ttggtaaccctaaagcatgatgacaaattacaagatggttctgaatgtgcttttcagtgt
gcccttctctataccactgtttatggccaaagaagaattcgagttacaaacttatccttg
ccatgcacaaatatgctaagtaatttgtttcgctctgctgacttggatactcagttcgcg
tgtttattaaagcgagctgccattgaaattcctacaagcccacttgtgcaagtgagggaa
caagtgacaaatctttgcatcaacattttgttttcatatcgtaaattttgcgccactgta
tcatcgtctgggcagcttattcttcctgaggcccttaagctacttcccctgtacaccctt
gcactaataaagagtacagggttgcggaatgatggcagaatagatgaccgttccttctgg
ttcaattatgtttcctctctttctactcctttgtcagtgccattggtttaccccaggatg
tttgctattcacaaccttagtacaaaggaagaagatgagtctgttcttcctcctataatc
cctctatctagtgaacatgtcagcgatgatggaatctattttctggagaatggtgaggat
gctttaatatattttgggagctcagtggattcaagtatcttgcaacaactttttggcttt
acctcagttgatgaagcccctagtcagtttgtgattcagcaatatgacaatccattatca
aagaagttcaacgatgtagtaaatgtggttcggcgccaaagatgttcctatctccgcttg
acattgtgcaagaaaggggatccatcaggaatgctgttcttctcatgcatggtagaagac
aagaatgcaagcggtccctcttatgtcgagtttctcgtacatattcatcggcaaatccaa
atgaaaatgtcgtaa
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