Gossypium hirsutum (upland cotton): 107901527
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Entry
107901527 CDS
T04793
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107901527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107901527
03036 Chromosome and associated proteins [BR:
ghi03036
]
107901527
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107901527
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107901527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
107901527
NCBI-ProteinID:
XP_016683071
UniProt:
A0A1U8IYC3
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Position
D06:20520276..20525021
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AA seq
715 aa
AA seq
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MPGVSSDSARGALVPLSPESPAAAVYPLRHGLKSPISRLSISWSRGNSLRVSVFAAPSSD
GSVNDGDGGKVVEVKLGGGDGEISEAHWRRMAYGSVSPFALLQSRKNAVSSLSKMSMNSS
PYDGDWWDYIMEYSKDINALLVNQKSASVPVLDDPKSFITKGEEPTSLKAAWELLEMFYA
EKPSHSWLPERLVDWLADYDSLFSGTHPTVHSKLVDFQKELVNLQVVEDDPKYWEVMSSA
LAVGWLNIVVKMLRLHGSYRLDQLSNRETENGLVEAVAVLISKMPRMRLEHEAGKLGECY
KAKPDFVKAWEKWRGQINKLDSSAFWFQCAHQQTREGLRSMLQIMLGNANSLCSATYNWI
ELYISHFLYMRPLTVGLESMYSLAQKSIQLKPMASAHRLMGLIIGILGENTEVVLAECLK
GFGPWMVAHAIELLTAGSDHAEMLLHEERQNLGGISIEELHRLVYAQVLSSFPLTWQIAP
IYLISCMKHGMVLLQILLSKQPVQDNQLLLKSIEICRLYELHSVTSNIMKIAGVHHWKHG
RKGSGVFWLQQARDEYRLNRIALQLFDSVGKTISDESFKQWEGLIQLLGSDSKTAGGLEF
LHKYRDFKKSLRQIHDGKATDSARQAVESLISLMKNPSTPQRFWLPLLYDSLKLLNWKER
PLLNVSQTNLLLNKLQELSMARLRPDFIESELPPQALNSVRLALGTNLGRAILEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtctcttctgattccgcccgcggcgctttggttccactttcacccgagtcc
ccggccgcggcggtgtatcctctccgccatggtctcaagtctccaatctctagactctcc
atctcatggtcacgcggtaactccctccgcgtctcggttttcgccgctccttcttccgat
ggctccgtcaatgacggtgacggaggaaaagtagtggaagtgaagctcggcggcggagac
ggcgagatcagcgaggctcattggcggaggatggcctacggttcggtctctccttttgct
ctactccaaagcaggaaaaatgctgtctccagcttgtccaaaatgtccatgaattcttca
ccttacgatggtgactggtgggattacataatggagtacagcaaggacataaatgccctt
ctagttaatcagaaatcggcttcagttccggttctcgatgacccgaagtcattcataact
aaaggagaggaaccaactagcttgaaggctgcgtgggagctattggaaatgttttatgca
gaaaagccatctcattcatggttacccgaacgccttgttgattggttagctgattacgat
agccttttctctggaacacacccgacagtccactcaaagcttgttgattttcaaaaagaa
cttgttaacttgcaggttgtggaggatgatcccaaatattgggaagttatgtcatccgca
cttgctgttggttggctgaatatcgtagttaaaatgttgcgcttgcatggatcttatcga
ttagatcaactcagcaatcgtgagacagagaatggtcttgtagaggcagttgccgttctt
atttcaaaaatgccacgcatgcgtttggaacatgaagccgggaaattgggtgaatgctat
aaggccaagcctgattttgtaaaggcatgggagaaatggcggggtcagataaataagctg
gattcaagtgctttctggtttcagtgtgctcaccagcagactcgggagggcttgagaagt
atgttacaaataatgctgggtaatgctaatagtctctgctctgcaacatataactggata
gagctgtatatttctcacttcctatacatgaggccattaacagtggggttagaaagcatg
tacagcttggcacagaaaagcattcaattgaaaccaatggcttctgcacataggttgatg
gggcttataattggaattcttggggaaaatactgaggttgtattagcagaatgcttgaaa
ggatttggtccttggatggttgcgcatgccatagagttgttgactgctgggagtgaccat
gcagaaatgcttttacatgaagagcgtcagaacttggggggaataagcatagaggagctt
catcgacttgtttatgctcaagtcctatcttcatttccattaacttggcaaattgctccg
atttatcttatatcatgcatgaagcacgggatggttctgttacagatattattgtccaag
caacctgttcaagataatcagttattgctgaagagcatagagatttgccgcctttatgaa
ctccatagtgtaacttcaaatattatgaagattgctggagtacaccactggaagcatggt
cggaaaggttctggagtcttttggcttcagcaagctcgggatgaatatcgtcttaatagg
atagctctgcagttgtttgattcagttggaaaaacaatctctgatgagagtttcaagcaa
tgggaaggtttaattcagttattgggttcagattctaagactgctggtggactagagttc
ctacacaaatatagagatttcaagaaatctcttcggcagattcatgacggaaaggctaca
gattctgctcggcaagctgtggaatctctcatatcacttatgaaaaacccttctacgcct
caacgcttttggctgccgcttctttatgattcgttgaagctgcttaattggaaggaacgt
cctttgttgaatgtgtctcagacaaatcttctattaaataaactacaagaattatccatg
gcaaggcttcggccggactttattgaatctgagttaccaccccaggccttgaactctgtt
agactagctcttggcacgaatcttggacgtgcaatcctagaggaatga
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