Gossypium hirsutum (upland cotton): 107901575
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Entry
107901575 CDS
T04793
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107901575
03036 Chromosome and associated proteins [BR:
ghi03036
]
107901575
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107901575
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107901575
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107901575
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
107901575
DSBR (double strand breaks repair)
Other DSBR factors
Others
107901575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WDR55
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40
Beta-prop_EIPR1
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_CAF1B_HIR1
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR41
Ig_SMCHD1_4th
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
107901575
NCBI-ProteinID:
XP_016683120
UniProt:
A0A1U8IYF1
LinkDB
All DBs
Position
D06:complement(22165007..22168852)
Genome browser
AA seq
525 aa
AA seq
DB search
MASQKLTDYERQRLENIKRNAEMVAALKLHSKAATLSAATAKRHRMKTFKASPEKKPKTE
TPIVIRRSLRTRGMPPDSKGLPDDFSDNFDKTPKSVSVIKPQSPRVLGPISMGDAFSGDD
ETESNKMLVGTILSIAKETQVGVSVKDVKDEIFSDKGALGSCKSEGFESLGTEKVDESLS
GKRKLVKGVVKNEYLDGLVKIEKSDQWLESLDLKPENVARLLPGRIMVVKFFPCSSVRMI
AAGNKFGNIAFWNVDSNNKKEDGIYLYRPHTGPISGILIHQHSMSKIYSSCYDGFIRLMD
AEKEVFDLVHSCDDTIFSLSQQPNNSETLYFAEGRGGLKVWDIRTGKSSRNWMLHEDRIN
TINFNSQNPNIMATSSTDGTACIWDLRSMSAHKLKTLKTVSHSRAVHSAYFSPSGSSLAT
TSLDNKVGIISGVNFEDACMIYHDNWTGRWLSSFRGIWGWDDSYIFIGNMKRGVDVISPS
QKRSVMTLQSPEMSAIPCRFDAHPYKIGMLAGATSGGQVYLWTPC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcagaaactaacagattatgaacgtcaaaggctcgaaaacataaagagaaac
gccgaaatggtggccgcactcaagctccactcaaaagcagccactctttcagccgccacc
gccaaacgccacaggatgaaaacgtttaaagcgagtccagagaaaaaacccaagacggaa
acccctatcgtaattcgacggtcgttgaggacgagaggtatgccgccggattcaaaaggt
ttgcctgatgacttttctgacaatttcgataaaacaccaaaatccgttagcgttataaag
ccgcaatcgcctcgtgttttgggtcctattagtatgggagatgcttttagtggagatgat
gaaacggagtctaacaaaatgctggttgggacaattttgagtattgcaaaggagacccaa
gttggtgtttcggttaaggatgttaaagatgagatttttagtgacaaaggagctttgggt
tcttgcaaaagtgagggttttgaatcactaggtacagaaaaggttgatgagagtttgagt
gggaaaaggaagttggtcaagggtgtggttaaaaatgagtatttggatggtttagttaag
attgagaagagtgatcaatggctggaatcgttggatttgaaaccggaaaatgtagcacgg
cttttgcctggaaggattatggtggttaagtttttcccttgcagtagtgtgaggatgatt
gcagctgggaacaaatttgggaatattgcattttggaatgtggattctaacaataaaaag
gaagatggcatatatctttatcgcccgcatactggccccatttctgggattttgattcat
caacattcgatgtcaaagatttatagcagctgctatgatggctttattcgattaatggat
gctgagaaggaagtttttgatctagtgcattcttgtgatgataccatattttccctctct
cagcagcctaataattcggagaccttatatttcgctgagggtcgtggaggattgaaggtt
tgggatattcggactgggaagtccagtagaaactggatgcttcatgaagataggatcaac
accataaacttcaactcacaaaatcccaacataatggcaaccagttcaacggatggaact
gcttgcatctgggatttaaggagtatgagtgcccataaactgaaaaccttaaagactgtg
agccatagtagggctgttcattctgcttacttctctccgtctggaagctctcttgcgacc
acaagtttggacaacaaggtgggtataataagtggagttaattttgaggacgcttgtatg
atataccatgataattggactgggaggtggctttccagtttcagaggtatatgggggtgg
gatgattcatacatcttcattggcaacatgaaaagaggtgttgatgtaatctctccatca
caaaagagaagtgttatgactttgcagagtccagaaatgtctgcaattccatgcagattt
gatgcgcacccatataaaattgggatgttagcaggagccaccagtgggggtcaagtttat
ctatggacaccatgttaa
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