Gossypium hirsutum (upland cotton): 107901610
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Entry
107901610 CDS
T04793
Name
(RefSeq) EIN3-binding F-box protein 1-like isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107901610
04075 Plant hormone signal transduction
107901610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107901610
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107901610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box
F-box-like
LRR_At1g61320_AtMIF1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
107901610
NCBI-ProteinID:
XP_016683169
UniProt:
A0A1U8J4N7
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Position
D06:23281827..23285584
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AA seq
672 aa
AA seq
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MSKLFAFSGSDDFCPGGSIYPNLKESSLFLYPNQDVYFPPCKRYRISAPFVFAGGKFEQK
KPSIEVLPDECLFEIFRRLPGGQERSTCACVSKRWLTLVSNIRRDEISDNKTPQASDLEH
ENTDKKGGVSSEDVDLDVEGDGYLSRSLDGKKATDIRLASIAVGTASRGGLGKLFIRGSK
SRHGVTTVGLRAISRGCPSLRVLSLWNLSSVGDEGLCEIANGCHQLEKLDLCHCPSITDK
SLLAVAKGCPNLTDLTIEGCANIGNEGLQAIARSCPNLKSVSIKDCPLVGDQGVASLLSS
ASYSLTKVKLQALNITDVSLAVIGHYGKAVTDLSLTSLPNVSEKGFWVMGNGHGLQKLKS
FTVTSCRGATDSGLEAVGKGCPNLKQLCLSKCPFLSDKGLSSLAKAAGSLECLQLEECHR
ISQFGFFCSLINCGAKLKVISFANCLGIKDLNSGLPPLSPCESLRSLSIHNCPGFGDASL
FALGKLCPQLQHVELCGLHGITDAGVLLLLESCEAGLLKVNLSGCVNLSDKVVQTISNLH
GWTLELLNLNGCKISDASLVAIAKNCQLLTDLDISKCTITDSGIAALAHFNPINLQILSV
SGCSMVSDKSLPSLGKLGETLLGLNLQQCKAISSRAVELLTEQLWRFPSSGMICYYFVSL
TMGVGFFMAEFP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctctttgcttttagtggaagtgatgatttttgccctggggggtcaatctac
ccaaacctcaaggagtcaagtctctttttgtaccctaaccaggatgtgtatttccctcct
tgcaagaggtaccgcatcagtgccccattcgttttcgctggagggaagtttgagcaaaag
aagccttcaatcgaggtcctccccgatgaatgcttatttgaaatcttcagacggttacct
ggaggccaagagaggagtacctgtgcttgtgtttccaagcgctggcttacacttgtaagc
aacatccgtagagatgaaatcagtgataataaaaccccccaagcttcggatcttgagcac
gagaataccgataagaaaggtggagtttcttctgaggatgtagatttggatgttgagggt
gatggatacctctcaaggagtttggatgggaagaaagcaacagatattagacttgcatct
attgctgtcggaacagctagtcgtggaggattggggaaacttttcattcgaggaagcaag
tccaggcatggagtaactactgttggcctcagagccatttcccgcgggtgcccttcttta
agggttctttccttgtggaatttgtcttctgttggagatgaaggtctttgcgagattgcc
aacgggtgtcaccagctagagaagcttgacctttgccactgtccctcaattactgataag
tctttgcttgctgtagcaaagggctgccctaacttgactgatctgaccatcgagggttgt
gcaaacattggaaatgaaggtcttcaagcaatagcacgtagctgtcccaatctaaagtcc
gtttccatcaaagattgcccccttgttggagatcaaggagttgcgagcctgttgtcttca
gcctcatattccctcacaaaagtcaagctccaggccttgaacatcactgatgtctctctt
gctgttatcggacactatggcaaggcagtgaccgacctttctctcactagccttccaaat
gtgagtgaaaagggcttctgggtaatgggtaatggtcatggactacagaaattgaaatct
ttcacagttacatcctgccgtggagcgacagattcgggacttgaagctgttggaaaaggt
tgcccgaatttgaagcagttatgcctcagtaaatgccctttcttatctgataaggggttg
tcgtctttagccaaagcagccggttcactagagtgcttgcaactggaggagtgccacaga
atctcccagtttgggtttttttgctcccttattaactgtggtgcaaagttgaaggttatt
tcctttgcaaactgtttaggcattaaggacctaaactcgggattgccacctctatcccct
tgtgaatcccttagatctttgtccatccataactgccctggtttcggcgatgctagcttg
tttgcgttggggaagttgtgccctcaactgcagcatgtagagttgtgtgggcttcatgga
ataacagatgctggggttctcctgttgctcgagagttgtgaggctggtttattaaaggtt
aatctcagcggttgtgtgaatttgagcgacaaagttgttcaaacgatctccaacttgcat
gggtggactctagaactgctgaatctcaatggttgcaagatcagcgacgctagtttagtt
gcaattgccaaaaactgtcagttgctaactgatctcgatatctccaagtgcaccatcacc
gattctggaatcgcagctctggctcatttcaatccgattaatctgcagatcctttcggta
tctgggtgctctatggtttcagacaaaagcttgccttcacttggaaaactgggtgagacc
ctcttggggttaaacctacagcaatgcaaagcaatcagcagccgtgccgtggagctactt
acggagcagctatggaggtttccatcatccgggatgatctgctactactttgtgagcctg
acaatgggcgtcggtttcttcatggctgaatttccctga
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