Gossypium hirsutum (upland cotton): 107901717
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Entry
107901717 CDS
T04793
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2-like
KO
K10751
chromatin assembly factor 1 subunit B
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107901717
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107901717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
107901717
NCBI-ProteinID:
XP_016683308
UniProt:
A0A1U8J3T2
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Position
A11:80274208..80278370
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AA seq
451 aa
AA seq
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MKGGTVQINWHDTKPVLTLDFHPISGLLATGGADFDIKLWVINSGEVQKKIPTASYQNSL
SYHGSAVNALRFSPSGDQLASGADGGELIIWKLHTTETGQSWKVFKSLSFHRKDVLDLQW
STDGAFLISGSVDNSCIIWDVNKGSVHQILDGHFHYVQGVAWDPLSKYVASLSSDRTCRI
YINKPKSKTKGAEKLNYICQHTIMKAEQQPIDDAKSVKNHLFHDETLPSFFRRLAWSPDG
SFLLVPAGSYKMSTSSETINTTYVFSRKDLSRPLQLPCANKPVVAVRFCPLAFNLRGSNP
AGFFELPYRLVFAVATLNSLYIYDTESVPPIAILAGLHYAAITDIAWSYDARYLALSSQD
GYCTLVEFEKEELGLPIPLAEPKIMNIEGTSSIVQKPDDMVIEVNDPVTADNRTVECAEK
REGKQASPSLANTPIVNKTAKRRITPMAIDP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagggacagttcaaataaattggcacgacaccaagcccgtcttaaccctagac
ttccaccccatctccggtcttctcgccaccggcggcgctgatttcgatatcaagctatgg
gtaattaattcaggcgaagtacagaagaaaatcccaactgcttcatatcaaaatagtctt
tcttaccatggctccgctgttaatgcccttcgcttctctccctccggggaccaacttgcc
tctggggctgatgggggtgagctgatcatatggaaattgcacactacagaaactggtcaa
agttggaaagttttcaagagtttgtcatttcaccgtaaagatgttctagatttgcaatgg
tcaactgatggtgcatttctcatctctggatctgttgacaattcttgtatcatatgggac
gttaacaaaggttctgtccatcagatattagatggtcatttccattatgttcaaggtgtt
gcatgggatcccttgtccaagtatgttgcttctctcagttcagataggacttgccgaatt
tatatcaataagcctaaatcaaaaacaaagggtgctgagaagttgaactatatttgtcag
cataccatcatgaaggcagaacagcagccaatagatgatgctaagtcagtaaaaaaccat
ctttttcatgacgaaacactgccatcattcttccgtcgattagcttggtcgcctgatgga
tcatttttactagtgccagcaggttcttataaaatgtcaacttcatctgaaacaataaac
accacttatgtcttttccagaaaagacctgtcaagacctttgcagctcccttgtgctaac
aaaccagttgttgcagtccgtttctgccctttagctttcaaccttcgaggatctaaccca
gctggttttttcgagcttccttatcgacttgtatttgctgttgcaactttgaattcattg
tatatttacgatactgagagtgttcctccaatagcaattttggctggtcttcactatgca
gccataactgacattgcatggtcatatgatgcacgatatttagcattgtcatctcaagat
ggttactgtacattggtagaatttgagaaggaagaactgggactacccattcctctagca
gaacctaaaataatgaacattgagggtacgagctctattgtccagaaacctgatgacatg
gtgattgaagttaatgatccagtcactgcagataacaggacggtagaatgtgcagaaaag
agagaagggaaacaggcatcgccaagtttggcaaatactcccatcgtaaataagacagcc
aagaggcgcatcactccgatggcaatcgatccatga
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