Gossypium hirsutum (upland cotton): 107901884
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Entry
107901884 CDS
T04793
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107901884
09124 Replication and repair
03420 Nucleotide excision repair
107901884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107901884
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107901884
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107901884
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
107901884
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107901884
TCR (transcription coupled repair) factors
Cul4-CSA complex
107901884
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107901884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
107901884
NCBI-ProteinID:
XP_016683539
UniProt:
A0A1U8J5Q4
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All DBs
Position
D06:52100929..52108526
Genome browser
AA seq
788 aa
AA seq
DB search
MKKAKSQAVACSLDPNRNGLHHHHNNQDDNNVLFDPSSMPLHDDSKSADARTPAAANLSR
KKATPPQPAKKLVIKLLKAKPTLPTNFEVETWAKLKSAITAIFLKRPDSCDLEKLYQAVN
DLCLHKMGGSLYQRIEKECEEHISTALRSLVGQSPDLVVFLSLVEKCWQDLCDQMLMIRS
IALYLDRTYVKQTPNVRSLWDMGLQLFRKHLSMAPEVEHKTVTGLLRMIEGERLGEVVDR
TLLNHLLKMFTALGIYSESFEKPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEMRLHEEH
ERCVLYLDALTRKPLIATAEKQLLERHIPAILDKGFVMLMDGRRLEDLQRMYSLFSRVNA
LESLRQAISSYIRRTGHVIVMDEEKDKDMVPSLLEFKASLDSIWEESFSKNEAFGNTIKD
SFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKALVLFRFIQGKDVFEAF
YKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSS
QARTKLPSGIEMSVHVLTTGYWPTYPPMGVRLPHELNVYQDIFKEFYLSKYSGRRLMWQN
SLGHCVLKADFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSL
ACGKVRVLQKFPKGRDVEDNDSFIFNDGFTAPLYRIKVNAIQMKETVEENTSTTERVFQD
RQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNN
PQIYNYLA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagccaagtcccaagccgttgcttgctccctcgacccaaacagaaacggcctc
catcaccaccataacaaccaagacgataacaacgtcctttttgacccttcatctatgccc
ctccacgatgattccaagtccgccgatgctcgtactcccgccgccgctaatttgtctcgc
aaaaaggctacccctcctcaacctgccaaaaagcttgtcatcaaactccttaaagcaaaa
ccaacattgcctacaaattttgaggtggagacatgggcaaagctgaagtcagccattact
gccatatttttgaagcgaccagattcttgtgacttagagaagctttaccaggctgtcaat
gatctgtgcctgcacaagatggggggaagcctttatcaacgcattgaaaaagagtgtgaa
gaacatatatctacagcactaagatctttggttgggcaaagcccagatttggttgttttc
ttatctcttgttgagaaatgttggcaagatctttgtgatcaaatgttaatgattcgtagt
atagccttgtatctagacagaacatatgttaaacaaaccccgaatgtacgttcattgtgg
gacatgggcttgcagctcttccgtaaacatctttccatggctcctgaagttgagcacaaa
actgtcacgggtcttttgagaatgattgagggtgagaggttaggtgaagtggttgatagg
actctccttaaccatcttttgaagatgtttactgctttaggtatttactctgaaagcttt
gagaagccattcctggagtgcacatctgagttttatgcagccgaaggaatgaaatacatg
cagcaatctgatgttccagattacctgaagcatgtagagatgaggttgcatgaagaacat
gaaagatgtgtactctacctggatgctcttacaagaaagccacttatagcaacagcagaa
aagcaactgcttgaacggcatatacctgctattcttgataagggatttgtgatgctgatg
gatgggcgtcgtcttgaggaccttcagagaatgtactcactgttttcaagggtcaatgcc
cttgaatcactccggcaggcaataagttcatatattcggagaactgggcatgtcattgtc
atggatgaagagaaagacaaggacatggtgccttccttgttagaattcaaagcttcgctt
gattcaatatgggaagaaagcttttccaagaatgaggcatttggcaacaccatcaaggat
tcctttgagcatctaattaatcttcgtcagaaccgacctgctgagctgattgcaaagttc
ctggatgaaaagctccgtgctggtaataagggtacttcggaagaggaattagagggtaca
ctggataaagctttggttttatttaggttcatccagggcaaggatgtctttgaagcattt
tataagaaagatcttgcaaaaaggctgcttctaggaaagagtgcttctattgacgcagag
aaatctatgattactaagctgaagactgagtgtggcagtcaatttacaaacaaacttgaa
ggaatgttcaaggatattgaactatcaaaggaaataaatgaatcattcaagcagtcatcc
caggccagaacaaagcttccatctggaattgagatgagcgttcatgtcttgacaactggg
tactggccgacatatccacccatgggtgttaggcttcctcatgaacttaatgtctatcag
gacatctttaaggagttctacttgagtaagtacagtgggaggcgcctaatgtggcaaaat
tcattaggtcattgtgtcttgaaagctgattttccaaaaggtaaaaaggagctggcagtt
tccttattccagactgtagttctgatgttgttcaacgatgcccaaaagcttagctttcaa
gacattaaggactctactggcatagaggacaaggaattgagaaggaccttgcagtccctt
gcatgtgggaaagtaagagtcctacaaaagtttccaaaagggagggatgtagaagataat
gactccttcattttcaatgatggatttactgctcctctctatcgtataaaggtaaatgct
atccagatgaaagaaacagtggaggagaacacaagcactactgaaagagtatttcaagac
cgtcaatatcaggttgatgctgctattgttcggataatgaagaccaggaaggtgttgagt
cacactcttctgataactgaactcttccaacagctcaagtttcccataaaaccggctgat
ttgaagaaaaggatcgaatctctcattgacagggagtacctggagcgggacaagaacaac
ccacaaatatacaattacttggcatag
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