Gossypium hirsutum (upland cotton): 107901916
Help
Entry
107901916 CDS
T04793
Name
(RefSeq) ubiquitin receptor RAD23b
KO
K10839
UV excision repair protein RAD23
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107901916
09124 Replication and repair
03420 Nucleotide excision repair
107901916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107901916
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107901916
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
107901916
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
107901916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
HBS1_N
TECR_N
Dsc3_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
107901916
NCBI-ProteinID:
XP_016683585
UniProt:
A0A1U8IZR3
LinkDB
All DBs
Position
D06:53308211..53312241
Genome browser
AA seq
373 aa
AA seq
DB search
MKLTVKTLKGTHFQITVNPNDTVMAVKKNIEGIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKSLGSAGASSAQPASSNPSTIAPVSNPTPTPEAPTQAPASMGT
TSASDAATANPNTNTYSQAASNLVAGSNLEQTIQQLMDMGGGNWDKETVTHALLAAYNNP
ERAVDYLYSGIPESAEVAVPVAHFSTNQTTETGAAPIAPVSGAPNSSPLNMFPQESLSGA
AAAGLESLDFLRNNQQFQALRSMVQSNPQILQPMLQELGKQNPQLLRQIQEHHAEFLQLI
NEPLEGSEGDVFDQAEQEMPHAISVTPAEQEAIQRLEAMGFERALVIEAFLACDRNEELA
ANYLLENAGDFED
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgttaaaaccctcaagggtacccactttcaaattactgttaaccccaac
gatacggttatggctgtgaagaaaaacatagaaggtatacaagggaaagacaattatcca
tgcggccaacagcttttgattcataatgggaaggttttgaaagatgaaactactttagct
gataataaagtctccgaggatggttttcttgtcgtcatgcttagcaagagcaagtccttg
ggttcagctggggcatcatctgctcagcctgcttcttcaaatccatctacaattgcacct
gtctctaatcctacccctacccctgaagctccaacacaagcaccggcttcaatgggcacc
acatctgcttccgatgctgcaacagctaatccaaataccaatacctatagtcaagctgct
tccaatttagtcgctggaagtaatcttgaacaaactatccaacaattgatggatatgggt
ggtggcaactgggacaaagaaacagtaactcatgcacttctggctgcttataacaatcca
gagagagcagtcgattatctatattctgggattcctgaatcagcagaagtcgctgtgcca
gtggctcatttttccacaaaccaaactactgaaactggtgcagctcctattgctcctgtt
tcaggggctcctaattcatctcctttgaatatgtttcctcaggaatcactctctggggct
gctgctgctgggcttgaatccttggatttcctcagaaacaaccaacagttccaagcattg
cgttcaatggtacaatcaaacccgcaaattcttcagcccatgctacaggagcttgggaag
caaaacccccagcttttaagacaaattcaagagcatcatgcagagtttcttcagctaata
aatgagcctctcgaaggttctgaaggggatgtatttgatcaagctgaacaagaaatgcct
catgctatcagtgttacaccagcagaacaggaggcaatccaacgacttgaagcaatggga
tttgagagagccctggtcattgaagcctttctggcatgtgaccggaacgaggaattggca
gcaaattacttattggagaacgccggagattttgaggattga
DBGET
integrated database retrieval system
