Gossypium hirsutum (upland cotton): 107901930
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Entry
107901930 CDS
T04793
Name
(RefSeq) proline--tRNA ligase, cytoplasmic-like isoform X3
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107901930
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107901930
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107901930
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
107901930
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
107901930
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107901930
Prokaryotic type
107901930
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
ProRS-C_1
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
107901930
NCBI-ProteinID:
XP_016683601
UniProt:
A0A1U8IZS9
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Position
D06:complement(55975632..55979607)
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AA seq
334 aa
AA seq
DB search
MKGRKSELGKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKSM
FWQNSWAYSTRTIGVMAMVHGDNKGLVLPPKVSALQVIVIPVPYKDADTQGIFDACAATV
VTLSDAGIRAEADLRENYSPGWKYLNWKMKGVPLRIEKGPRDLANNQVRAVRRDNGEKAD
ISRVFLVEQVKGMLDKIQQNLFDVAKQKRDACIEVVKTWDEFVKALGQKELILAPWCDEE
EVEKDVKARTRGEMGAAKSLCTPFEQPELPEDIEGVAEDSISSSWKSQGLALLQVECYLM
LHSMVVYPTQNLNLVLLKQCFVATLCTSFFNHDC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcaggaagagtgaactggggaagtttgctggtggactttacacaaccagtgtt
gaggcatttattccaaacactgggcgcggtattcaaggtgcaacctcccattgtttgggc
caaaactttgcaaaaatgtttgagataaactttgaaaatgaaaaaggggaaaagtctatg
ttctggcagaattcctgggcatatagcactcgaacgattggggtaatggcgatggttcat
ggggataacaaaggcttagtgctgcctccaaaagtttcagctttgcaagttattgtgatt
cctgtgccttacaaagatgcagatactcaaggtatctttgatgcctgtgctgccaccgtg
gtaaccctctctgatgctggtattcgtgctgaagctgatcttagagagaactactcacct
ggttggaagtacttaaactggaaaatgaaaggtgttcccctaaggattgaaaaaggacct
cgagacttggcaaataatcaggtgcgtgcggttcgccgtgacaatggagaaaaggctgat
atctctagagtctttttggttgaacaagtaaaaggaatgttggataagattcaacagaac
ctattcgatgtggcaaaacaaaaaagagatgcctgcattgaagttgtaaaaacatgggac
gagtttgtaaaagctcttgggcaaaaagaactgatcttagctccttggtgtgatgaggag
gaggtggagaaagatgtgaaagctcgaacaaggggtgagatgggagcagctaagtctctt
tgtaccccattcgaacagcctgaactcccagaagatattgaaggtgtagcagaggattca
atctcttcaagctggaaaagccaaggcttagcacttcttcaagtggaatgttatttaatg
ttgcattccatggtcgtttatcctactcagaacttgaatttggtgttattgaaacagtgt
tttgtagctaccttgtgtactagcttctttaaccatgattgttaa
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