Gossypium hirsutum (upland cotton): 107902008
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Entry
107902008 CDS
T04793
Name
(RefSeq) putative RNA methyltransferase At5g10620 isoform X1
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107902008
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
107902008
Ribosome biogenesis [BR:
ghi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
107902008
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-GeneID:
107902008
NCBI-ProteinID:
XP_016683695
UniProt:
A0A1U8J034
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Position
D06:26911480..26914761
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AA seq
277 aa
AA seq
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MMIDVFSFSPPAGSRGKRTFPEPQTNFILFSVFRNAVVSTLFDTSHPLLPAINEINSFLF
LNYKKKTSYGLDAISNCRIIKLMMTMATAMGISACGVSLQWTNPNSYSSGKGCKYAGQSV
RALPIRTLTVGKKRLPGVQLLVDEYIAKLKSYCHVDDVQIRSNPKNARNVMAQVHDEDIA
VINLITSNDWVVMLDERGLDLSSEQLAELLGDAGNTAASRLSFCIGGPYGHGQRVRKRAN
VSIKLSSMVLNHQIALVVLMEQIYRSWTILKGQKYHH
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgatgtcttttctttctctcctcctgcaggttctagaggcaaaaggacgttt
ccagaaccccaaacaaatttcattttattctcggtatttagaaacgctgtcgtttctacc
ctttttgacacttcccacccactgcttcccgcgataaatgaaatcaacagtttcttattt
ctcaattacaaaaagaagacaagttacggtcttgacgccatttccaactgtagaattatt
aagttgatgatgacaatggcaacggcaatggggatctcagcatgtggggttagtcttcag
tggacgaatcccaactcttattcgtcaggtaaaggatgcaaatatgctggtcaatccgtg
agagcgttacctattcgaaccctaacggtagggaaaaagaggctcccaggtgtacaattg
ctggtggatgaatatattgcaaagctcaaaagttattgtcatgttgatgatgttcaaatt
cgctccaatcctaaaaatgcgcgcaatgtgatggctcaggttcatgatgaagacatagct
gtcatcaaccttatcacgtctaatgattgggtggtgatgttggatgagcgtggactagat
cttagctctgagcaattggctgaattgttaggggatgctgggaatacggcagcttcaaga
ttatcattttgcattggtggaccatatggtcatggacaacgagtgcgaaaacgtgcaaat
gtgtcgatcaagttgtcgtcgatggtattgaatcatcaaattgcacttgttgtgctcatg
gaacaaatttatagatcatggactattttgaaaggacaaaagtaccatcattag
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