Gossypium hirsutum (upland cotton): 107902152
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Entry
107902152 CDS
T04793
Name
(RefSeq) peroxisome biogenesis protein 5 isoform X1
KO
K13342
peroxin-5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107902152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107902152
Membrane trafficking [BR:
ghi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
107902152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_17
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_19
TPR_14
TPR_7
TPR_9
TPR_12
PPTA
TPR_20
NGF
TPR_10
TPR_Slam
ARM_TT21_5th
DUF1543
PEX18_PEX21_C
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
107902152
NCBI-ProteinID:
XP_040948527
UniProt:
A0ABM3A0W9
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All DBs
Position
D05:66446648..66453977
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AA seq
740 aa
AA seq
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MSMRELVTGGAACAVPGSSSSSSNPLGAFANALIGSSSKTQGVLKEIPNAAAASPHAQFY
PHADDPVAALPGSELDRPFLQSNPQGSEFIRGFRTADANGLADAWEEIQRQPHFDRVYEG
ATPAPPIQPSLDGPPQRVLSSFLHSFVDSSRSGIPLHPTPLPLLGLSQGDKQCIRDRSSI
MARHIFADKSEEFINAQVNALLSSLEIENDIHARGPMPGRFRELEDYWNESQGVLKPGAH
AADGWVTEFSQNRPHHGDLEAWAHSFEQKHGAGGWASEFEQEQAQLTSVDQMRGGNIESL
AAIQQTRMLAHTLSQNSDPKFQSSKFLQFVSKMSRGELIIDDNQVKPASENWATEYQQQY
NGGASWADEFVHDEVFRGPDHWANEFGAERLQQESVDDQWVNEFSKLHVDDWAEEFGRQV
GEGALGDSSSDNWANSYDEFLNEQLAAKQRSDASRGVYVFSDMNPYVGHQNPLKEGQELF
RKGLLSEAVLALEAEVMKNPENAEGWRLLGITHAENDDDQQAIAAMMRAQEADPTNLEVL
LALGVSHTNELEQTAALKYLYGWLRHHPKYGTLAPPELANSLYYADVARLFNEAAQMSPE
DADVHIVLGVLYNLSREYDKAIASFKTALKLKPNDYSLWNKLGATQANSVQSADAILAYQ
QALDLKPNYVRAWANMGISYANQGMYEESIRYYVRALAMNPKADNAWQYLRISLSCVSRN
DMVEACDSRNLEILQKEFPL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcgtgaactggttacgggaggagctgcttgtgccgttcctggttcttcttcc
tcttcctccaatcctctaggtgctttcgccaacgctcttatcggttcttcttccaagacc
cagggggtgttgaaggagattccaaacgcagcagcagcttctccccacgcccaattctac
ccccacgccgatgatcccgttgctgctcttcctggctctgagctcgaccgcccctttctc
caatctaatccccagggctccgagttcatcagaggcttccgcactgccgatgccaatgga
ctcgcagatgcatgggaagagatacagcgtcaacctcactttgaccgcgtttacgagggt
gccacgccagcaccaccaattcaaccctctcttgatggaccacctcaaagggtgctgtca
agctttttgcactcctttgttgacagtagccgaagtggaattcctttacaccccacccca
cttcctctgttaggattgtctcaaggtgataagcagtgcatacgtgatcgtagcagcata
atggcccgacacatttttgctgataagagtgaagaatttatcaatgctcaggtaaatgca
ctcttgagttccttggaaatagaaaatgatatccatgccaggggacccatgcctgggaga
tttagagaactggaggactactggaatgaatcccaaggtgtcctgaagcctggtgctcat
gctgctgatggatgggttactgaattcagccaaaatagaccacaccatggtgatctggaa
gcttgggctcactcatttgaacaaaagcatggtgctggtggttgggcctctgaatttgag
caggaacaagctcagttaacatctgtagatcaaatgagagggggaaatatagaaagtttg
gctgcaattcagcagactaggatgcttgcacatacactctctcaaaacagtgatcctaaa
tttcagagttcaaaatttcttcaatttgtatcaaagatgagtcgtggcgaacttatcatt
gatgataatcaggtcaaaccagcatcagagaactgggcaacagaatatcagcaacagtac
aatggaggtgcttcttgggctgatgaatttgttcatgatgaggttttccgtggacccgac
cattgggccaatgaatttggtgctgaaagattgcaacaagagtctgttgatgatcaatgg
gtcaatgaattctcaaagttgcatgttgatgactgggcagaagaatttggtcgtcaagtt
ggtgagggggctttgggagatagttcgtctgataactgggcaaattcatatgatgagttc
cttaatgagcaattagctgctaagcagcggtcggacgcttcaaggggtgtttatgtattt
tctgatatgaatccatatgttggtcatcaaaatcctttaaaagaaggtcaagagctattc
aggaaagggcttttgagtgaagcagtgcttgccctagaggctgaagttatgaaaaatcct
gagaatgctgaaggttggagattgctaggaataacccatgctgaaaatgatgatgaccaa
caggctattgcagcaatgatgcgtgctcaggaggccgatcctaccaatctggaagtactt
cttgctcttggtgtgagtcatacaaatgaattggaacagactgctgctttaaagtatctg
tatggatggttacgtcatcacccaaagtatggtactcttgcgccaccggagcttgctaat
tctttgtattatgctgatgttgctagattattcaatgaagctgctcagatgtctcctgag
gatgctgatgtacacattgtccttggtgttctgtataacttgtcgagagaatatgataag
gccattgcatctttcaaaactgctttgaaacttaaacctaatgattattctctttggaac
aagcttggtgcaacacaagccaacagtgtgcagagtgctgatgcaatattagcttatcaa
caggcactagatttgaagccaaactatgtgcgtgcttgggcaaacatgggtatcagttat
gccaaccagggtatgtatgaggagtcgatccgatattatgttcgagctctggcaatgaat
cccaaggctgataatgcatggcaatatctaagaatatctttaagctgtgtctcgcggaat
gatatggtggaagcttgtgattccaggaatcttgagattttacagaaggagtttcctcta
tga
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