Gossypium hirsutum (upland cotton): 107903185
Help
Entry
107903185 CDS
T04793
Name
(RefSeq) neutral ceramidase 2-like
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00600
Sphingolipid metabolism
ghi01100
Metabolic pathways
Module
ghi_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
107903185
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
107903185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Toxin_18
Motif
Other DBs
NCBI-GeneID:
107903185
NCBI-ProteinID:
XP_040948597
UniProt:
A0ABM3A151
LinkDB
All DBs
Position
D05:16274320..16277503
Genome browser
AA seq
753 aa
AA seq
DB search
MHKHQHLLPIFVALCAAFALIDEVDGEYLIGVGSYDMTGPTAGVNMMGYANIDQNTAGIH
FRLRARTFIVAESSQGARFAFVNLDAGMASQLVTIKVLQRLKTRFGDLYTQENLAISGTH
THAGPAGYLQYVVYSVTSLGFINQTFDAIVTAIEQSIIQAHNNLKPGSILLNTGDVENAG
INRSPSAYLFNPPEERARYTTNVDTTMTLLKLLDSASNRSIGAFSWFATHGTSMSRENRL
ISGDNKGAAARFFEDWFTFSNNSLSTRNTKFSTIQNISTLRNKAQKIKATGGKPCGKTTS
QGFKVRKNDGSRFVGAFCQSNVGDVTPNVLGAFCTDTGKPCDFNHSSCNGNDQLCVGRGP
GYPDEILSTKIIGERQFEKAMELFSSATNPLSGKIDYRHAYINFTSIEVQLNESTVVKTC
PAAVGAGFAAGTTDGPGVFGFQQGDTEINEMWKRLRDLLKEPSQYQVDCQKPKPVLLSTG
EMFVPYAWAPAILPIQILRLGNFVILSVPGEFTTMAGRRLREAVKETLINNGNGEFDNET
HVVMAGLTNTYSQYIATFEEYKQQRYEAASTLYGPHTLSAYIQEFKKLAKAMATGEQLGG
TGLSPPDLSSVQLSLLQDPLGDSPPPGKRFGDMLQDVAQPKGGSFKKGDKPSATFWSANP
RYDLLIEGTFAVVEMLQGERWVPVYDDDDFCLYFKWNVTVDNGSLYGLATIEWEVPEDAA
SGVYRLRHFGSSKKTKDSPNEFFTGASSAFTVS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcataagcaccagcatttgttaccgatttttgttgctctttgtgcagcttttgccttg
atagatgaagttgatggcgagtatttgattggagtcggaagctacgatatgacgggtcct
accgctggggttaacatgatgggctatgctaacatagatcagaatacggccggaatccat
ttccgactacgagcgagaactttcatcgttgctgaaagttctcaaggtgcaaggtttgct
tttgttaatcttgatgcaggcatggcatcgcaacttgtcactataaaagtgcttcagaga
ctcaaaacaaggttcggagatttgtatacacaagaaaatttggcgatcagtggcacgcat
acacatgctgggcctgctggttacttgcagtacgtggtttactctgttacttcactaggg
tttatcaaccaaacgttcgatgcgattgtcacggcgatcgagcaaagcattattcaggct
cacaacaacctaaaacctggctcaatcttgttgaacaccggggatgtggaaaatgcggga
ataaataggagcccaagtgcgtacctgttcaaccctccagaagaaagggctagatacacc
accaacgttgatacaacaatgaccctgttgaagcttttggatagtgcaagcaataggagc
ataggtgcattctcctggtttgccacgcatggaacgtccatgagccgagaaaacaggctc
atcagtggagacaacaagggcgccgctgccaggttttttgaagactggttcacttttagc
aacaattccctctctactcgaaacaccaagttttctaccattcaaaacatcagcacacta
agaaacaaagctcaaaagatcaaggccacgggaggaaaaccctgtgggaaaacaaccagc
caaggcttcaaggtgagaaaaaacgatgggtccagatttgtgggggctttctgccaatca
aatgttggagatgtgaccccaaatgtgctaggagcattttgcacagacactggcaagcct
tgtgatttcaatcactcgtcttgtaatggcaatgaccagctttgcgtggggcgtggccct
ggatacccagatgaaatattgagcacaaagatcataggagagaggcaattcgaaaaggcc
atggagctattcagttctgctactaatcctttgagtggaaaaattgattaccgccacgcg
tatataaatttcaccagcattgaagtgcaattgaatgaaagtaccgtggtaaagacttgt
ccagcagctgttggagcgggttttgctgctggaactacagatgggcccggagtgttcggt
tttcaacaaggagacaccgagataaacgagatgtggaaacgattaagggacttgttgaaa
gagcctagccagtatcaggtagattgccaaaaacccaagcccgttttgcttagcactggc
gaaatgtttgtcccctatgcttgggcgcccgctatactcccaattcaaattctgaggttg
gggaattttgttatcttatctgtgcctggagagttcacgacaatggctggtcggcggctg
agggaagcagttaaagagacattgataaataacgggaatggagaatttgataacgagaca
catgttgtaatggcagggctcacaaacacttattctcagtatatagcaacttttgaggag
tacaagcagcagcgatacgaggctgcttcaacactatatggtcctcatacattatcagct
tacatccaagagtttaagaaacttgcaaaagcaatggctactggagaacagctcggtgga
accggcttgtcacctccggatctttcctctgttcaactcagcctcttacaagatcctcta
ggagactcaccgccccctggcaaaagatttggagacatgctgcaagatgttgctcaacca
aaaggcggatcattcaagaagggagataaaccgagtgctacgttttggagcgctaatcca
agatatgacctgctgatagaaggcacatttgcagtagtagagatgcttcaaggggagagg
tgggttccagtgtacgacgatgacgatttttgcttgtattttaagtggaatgtaacagtt
gataacggtagtttgtatggtttagcaaccattgaatgggaagtgccagaggatgctgct
tccggtgtttatcggctcaggcactttggatcgtctaagaaaacgaaggactctccaaat
gagttctttacaggcgcatccagtgcattcacagtgtcatga
DBGET
integrated database retrieval system
