Gossypium hirsutum (upland cotton): 107903419
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Entry
107903419 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor CWC25 homolog
KO
K28450
pre-mRNA-splicing factor CWC25
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107903419
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107903419
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CWC25
Cir_N
DUF3417
Motif
Other DBs
NCBI-GeneID:
107903419
NCBI-ProteinID:
XP_016684951
UniProt:
A0A1U8J3Q9
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Position
D02:600495..602815
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AA seq
411 aa
AA seq
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MALKFLNKKGWHTGSLRNIENVWKAEQKHEAEQKKLEELRKQIHEERERSEFRLLQEQAG
LVPKQERLDFLYDSGLAVGKGASSSAAGGSGGGGFKALEEALPGSKAGTDGNANQSSAPG
ALFEDKPHSANDTWRKLHSDPLLMIRQREQEALARIKNNPVQMAMIRKSVVDKKQKEKSP
DHKEHRKKHHCSSSKHRKHSSSKRHSYSEDDTSKEDKKDKNHHRKRSDYEGHYRRTESDS
EHELKETEREEKSHRRQKYGYDDQDVDKRSHDKSKRDKYSSQAPRSIDADKNQEKDRRSY
DHRDTGPRDNKRRGVSHKLSEEERAARLREMQEDAELHEEQRWKRLKKAEENDAREATLS
STSVGKNFLDAANRSIYGAEKGGSSTIEESVRRRAHYSQGRYESERNAFRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaagtttctgaacaagaaaggatggcataccggtagcttgaggaacatcgaa
aacgtgtggaaagcggaacaaaagcacgaggctgagcagaagaaattggaagagcttcgt
aagcagattcatgaagagagggaacgctctgagttccgtcttctccaagaacaagctggc
cttgtcccgaagcaggagaggttggattttctctacgattctggacttgctgttgggaaa
ggtgctagtagctccgctgctggaggtagcggaggtggaggtttcaaggctctcgaagaa
gcccttccggggtcgaaggcaggtactgatggtaatgccaaccagtcttctgcgcccggt
gcgttgtttgaagacaaacctcactcggctaatgatacctggcgtaagctccattcagat
ccgttgcttatgattcgccagcgcgaacaagaagcacttgctcgtatcaagaacaacccg
gtccaaatggccatgatacgcaaatctgttgtagataagaaacaaaaggaaaaatcccct
gatcataaggaacaccgtaagaagcatcactgtagtagttccaagcatcggaaacattca
tcgtctaaacggcattcatattctgaagatgacacttctaaggaggacaaaaaagataaa
aatcaccatcgcaagaggtcagattatgaggggcactatcgcagaacagaatcagattca
gaacatgaattaaaggaaacagaaagggaagagaagagtcaccgcaggcagaaatatgga
tatgatgatcaagatgttgataagaggagccatgacaagtctaagcgtgataaatattct
tctcaagctccacgaagtatagatgcagataaaaatcaagaaaaagatcgacggtcttat
gaccatagagatactggacctcgggataacaagcgccggggtgtttcccataaactttct
gaagaggagagagctgcccggcttcgtgaaatgcaagaggatgctgagttgcatgaagag
caaaggtggaagcggttgaaaaaggccgaggagaatgatgctcgggaggctacactgtcc
agcacatctgttggcaaaaacttcttggatgctgccaatagaagcatttatggtgctgag
aagggtggaagctcaacaatagaagagagcgtccgtcgtagggcgcattattcacaaggc
cgttatgaatcagaaagaaatgcttttagacgttga
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