Gossypium hirsutum (upland cotton): 107903439
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Entry
107903439 CDS
T04793
Name
(RefSeq) protein argonaute 1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107903439
03036 Chromosome and associated proteins [BR:
ghi03036
]
107903439
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107903439
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107903439
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107903439
microRNA pathway
RISC loading complex
107903439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107903439
NCBI-ProteinID:
XP_016684980
UniProt:
A0A1U8J3R0
LinkDB
All DBs
Position
D05:65185150..65199220
Genome browser
AA seq
1010 aa
AA seq
DB search
MVRKKGTDSAGGESSQSHDTGVGSGRGSQGPPQQLGRGEGGGGYSGGGRDWVPQSQQPGR
GGYGAGGPPEYQSRGRGWPSHRRGYRGGRGRGGYGRGRAGHGSRGVPFPSGPSRPRVPER
HQATEPFETAVTPQPDPSEAGSSSRPPEHVPLTEQLQHLSIKQEASRAIQPVPPPNKPLR
FPRRPGLGCEGTKFVVKANHFFAEFPNKDLYQYDVIIITPEVTLRRVNRDVMQQLVSLYK
CSDLGERDPAYDGRKSLYTAGSLPFESKEFKVTISDENGRESEFKVMIRLAGRTELHRLR
QFLQGDQVDVPKDALQALDIVLRELPATNTSYCPVGRSFYFRDELRKDLDQGLQAWRGFY
QSTRPTQRGLSLNIDVSSTAFIQPLPVIEFVTNLLNRNVSSGPLYDPDRVKIKKALLGVK
VQVTHRGNMRRKYRISGLTSQATGQLTFPVDERGAEKSVVDYFSETYSITIQRTQWPCLQ
VGSQQRPIYLPMEVCKIVDGQRYSKRLNEKQITGLLEFTCQRPKNREDDILKTVKKNAYA
DSKCQTEFGIKIIEKLALVNARILPAPLKMVDWGTVNNCICISFCSKVGPKLAHNFWTKL
ADTCRIYGMAFNSVPVIPPLNASPDQVEEVLKTLYRKAMNKLQQNKELDLLIAILPDNNG
SLYGDLKRICETDIGIVSQCCLSKYVLDIKGPYLTNVALKINVKVGGSNTALAAAIPSVS
DRRTIIFGADVTHPSPGEDSSPSIAAVVASQDWPEITKYAALVCTQAHRKEVIQDLYKTW
QDPVRGIVSGGMIKEHLISFQRANGGHKPERIIFYRDGVSEGQFSHVLSEELDDIRKACA
SLEPNYKPTVTFIVVQKRHHTRLFAKNHNDRKFADLKGNILPGTVVDSDICHPTEFDFYL
CSHAGIMGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAA
FRARFYMERETSESGSRLGSSRSTRGPDGSVAVRPLPALRENVKRVMFYC
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaagaagggaactgattctgctggaggcgagagctctcagtcccatgatact
ggagttggcagtggtcgtggttcccaaggtcctccacaacaactaggcagaggtgaaggt
ggaggaggatactccggtggtggtagagattgggttccacagtcacagcaaccgggtcgt
ggaggttatggtgctggtggaccccctgaataccaatctagaggaaggggatggccttcc
caccgaagaggttatcgtggtggtcggggtcgcggtggctatggtcgtggtcgagcagga
catggcagtcgtggagtacctttccccagtggaccatcccggccgcgtgttcctgagcgg
caccaagcgactgaaccttttgaaactgcggtaactccccagcctgatccatctgaggca
ggttcgtcatccagaccgcctgagcatgtaccattgacagagcagcttcagcatctttcc
atcaagcaagaagctagccgagcaattcagccagtcccacctccgaacaagccattgagg
tttcctcgtcggccgggattgggatgcgagggaacaaagttcgtagtcaaggctaatcat
ttttttgctgaatttccaaataaagatttgtaccagtatgacgtgattatcataacacca
gaggtcacattacgacgagtgaaccgagacgtcatgcaacagctggtgagcttatacaaa
tgttcagatcttggagagcgcgatcctgcatatgacggccggaagagtctttatactgct
gggtctctcccttttgagtcaaaggagtttaaggtcaccattagtgatgaaaatggaaga
gagagcgaatttaaagttatgatcagattggctggacgtactgaactgcaccgtcttcga
caatttttgcaaggggaccaagttgatgtacctaaagatgctcttcaggctcttgacatt
gttctccgcgaactacccgctactaatactagctactgtcctgttggccgttcattttat
ttccgtgacgaactgagaaaagatttggaccagggactacaagcctggcgtggcttttac
caaagtacacgtcctacacagaggggattatcactgaatattgatgtgtcttcaactgct
ttcatccagccattgccagttattgaatttgtaacaaatttgctaaatcggaatgtttct
tccgggcctctatacgacccagatcgtgtgaagatcaaaaaggctcttctaggagttaag
gtgcaagttacgcatcgtggaaacatgcgaagaaaatatcgtatatctggtttaacatca
caggcaactggacaactgacttttcccgtagatgaaaggggtgcagagaaatcagttgtg
gactacttttctgaaacttacagtatcaccattcaacgcacgcaatggccatgtcttcaa
gttggaagccagcaaagaccaatttatttgccaatggaggtatgcaagattgtggatggt
cagagatactccaagagattgaatgagaaacagatcactggtttgctggagttcacctgc
cagcgtcctaagaatagagaggatgatattttgaagacggtaaaaaaaaatgcttacgct
gacagcaaatgtcaaacagaatttggaattaaaatcatagagaagcttgctttggttaat
gcacgcattctgcctgcacccctgaaaatggttgattgggggaccgtaaataactgcatc
tgcataagtttttgtagcaaagttggacctaaactcgcacataacttttggacaaaactt
gcagacacgtgtcgcatttatggcatggcatttaattctgtaccagtgattcctccattg
aatgcttctcctgaccaggtggaggaagtcttgaaaacactgtatcgcaaagccatgaat
aaactccagcaaaacaaagagcttgacctgcttattgctattctaccagataataatggc
tctctttatggtgatttgaaaaggatttgtgagacggatattggaattgtttctcagtgt
tgtttgtctaaatatgtacttgacataaaaggaccatatctgaccaatgtggcattgaag
attaatgtcaaggttggtggaagtaatacagctcttgctgctgcaataccttcagtcagt
gatcggcggactataatttttggtgctgatgttacccatccttcccctggggaggattca
agcccttctattgcagctgttgttgcctctcaagattggccagagattaccaagtatgct
gctctggtttgtactcaagcacatcgcaaagaggtcattcaagatttatacaagacatgg
caggatcctgttaggggaattgtatctggaggcatgattaaggaacacctaatatcattc
caaagagccaatggaggacataagccagagcgcatcatattctacagggatggtgttagt
gaaggccagttttctcatgtattgagcgaagaacttgatgatattcgtaaggcatgtgcc
tctttggaaccaaattataagcctactgttacttttattgtggtacaaaagcgacatcat
acaaggttgtttgctaaaaaccacaatgaccgcaaatttgctgaccttaagggaaatatt
ttgcctggcacagtggtggactccgatatatgtcatccaacagagtttgatttctactta
tgcagccatgctgggattatgggaacaagtcgtccggctcattaccatgtgctatgggat
gagaacaacttcacagctgatgcattgcagactcttacaaacaacctgtgctatacatat
gcaaggtgtacccgatctgtgtccattgtccctcctgcatattatgctcatcttgctgca
ttcagagctcgtttttacatggaacgggagacatctgagagtggatcaaggcttggaagt
tcaagaagcacaagaggacccgatggtagtgttgctgtgagacctctgccagctctcagg
gaaaatgtcaaaagggttatgttttactgttag
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