Gossypium hirsutum (upland cotton): 107903529
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Entry
107903529 CDS
T04793
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
107903529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107903529
Membrane trafficking [BR:
ghi04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
107903529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT
Beta-prop_EML
PEP5_VPS11_N
EIF3I
WD40_MABP1-WDR62_2nd
HEAT_2
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
PROPPIN
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
107903529
NCBI-ProteinID:
XP_040943851
LinkDB
All DBs
Position
D02:442180..453812
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AA seq
1355 aa
AA seq
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MALGDLMTSRFSQLSLAVSNHVIDGNVSSGGYHEDDVAYSDLMSQRRDLDAASTSSYANA
VTSTASVPTTMAYLPQTVVLCELRHAAFEASTPTGPSDSGLVSKWRPKDRMKTGCVALVL
CLNISVDPPDVIKISPCARMECWTDPFSMAPQKALETIGKNLRDQYERWQPKARSKVELD
PTVDEVKKLCNTCRRYAKSERVLFHYNGHGVPKPTANGEIWLFNKSYTQYIPLPISDLDS
WLKTPSIYVFDCSAAGMVVNAFIELLDCGTSNYPGSSRDCILLAACEAHETLPQSAEFPA
DVFTSCLTTPIKMALRWFCTRSLLHESLDSSLIDKIPGRQNDRKTLLGELNWIFTAVTDT
IAWNVLPHDLFRRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPMLPPTHQHHMWDAW
DMAAEICLSQLPSLVEDPNAEFQPSSFFTEQLIAFEVWLDHGSEHKKPPEQLPIVLQVLL
SQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILAL
DKSCQVDLVKDGGHVYFIRFLNSAEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIQV
CLKQLHGFTQNEAQTEPLLLQWLCLCLGKLWEDFTEAQTIGLQADVPAICAPLHSEPQPE
VRASAVYALATLLDVGFDSFRDGIGGDEECDDVEKNRAEMIIIKSLLNVVSDGSPLVRAE
VAVALAHFAFGHKQHLKSIAAAYWKPQPNSLLNSLPSLANIKGTGSGNIVSSQIGPLTAM
VRDGRVSTSSPLATAGIMHGSPLSDDSSQLSDSGILNDGVSNGEVNHSRPKPLDNAMYSQ
CVLAMFTLARDPSPRVASLGRRVLSIIGIEQVTKSVKPAGNSAWPSDPANSSSTPSISGL
ARSSSWLDINGGHMALTFRTPPVSPPRQNYLAGIRRVCSLDFRPHLMNSPDSGLADPLLG
SASGSERSLLPQSTIYNFSCGHFCKSLLTASDDSEELLAKREEQERFALEHIAKCQHSSV
SKLNNNSQIASWDTRFETGTRTALLQPFSPIVIAADENERIRVWNYEEATLLNGFDNHDF
PEKGISKLCLLNELDDSLLLVASSDGNIRIWKDYTLRGKQKHVTAFSSIQGHKPGMRSLN
AVVDWQQQSGYLYASGEISSIMLWDLDKEQLVNSIPSSSDCSVSALASSQVHAGQFAAGF
VDGSVRLYDIRTPDMLVRTTRPHTQQVARVVGIGFQPGLDQGKIVSASQAGDIQFLDIRS
QRDTDLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLKGEQLGTIRYQHTFMAQKI
GSVSCLTFHPYQVLLAAGAADACVSIYADDNSHTR
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcattgggcgatctgatgacgtcacgattttctcaattgtcgttggcggtatcgaat
catgtcatcgacggtaacgtcagcagtggcggctaccatgaggacgatgttgcttattct
gacttgatgtctcagaggagggatttagatgctgcatcaactagcagttacgccaatgcc
gttacttccacggccagtgtgcctacgaccatggcttacttgccgcaaactgttgtttta
tgcgagcttcggcatgctgcctttgaagcttccacgccaactggaccctctgatagtggg
cttgtttccaaatggcgccccaaggacagaatgaagacaggatgtgtggccctagtttta
tgtttaaatatcagtgttgatccacctgatgtaataaaaatatctccttgcgcaagaatg
gaatgctggactgaccctttttctatggcaccacaaaaagcactggaaactattgggaaa
aacttgagagatcaatatgagaggtggcagcccaaggctcgcagtaaggttgaacttgat
cctacagtggatgaagtgaagaaactttgtaatacatgtcgcagatatgccaagtcagag
agagttttatttcattacaatggacatggtgttccaaagccaactgcaaatggtgaaatc
tggctgtttaataagagttatacacagtatattcccttgcctatcagcgatcttgattct
tggttaaaaacaccctctatatatgtttttgattgctctgctgcaggaatggttgttaat
gccttcattgagcttcttgactgtggcacttctaactaccctggatcttcaagagactgc
attcttctggctgcatgtgaagcacatgagactcttcctcaaagtgctgaatttcctgct
gatgtgtttacttcttgtcttactacacctatcaaaatggcattgagatggttttgtaca
cgttcattgcttcatgagtctcttgattcttcacttattgataaaattcctggccgtcaa
aatgaccgtaaaacacttctaggggaattgaattggatatttactgcagtgacagacaca
attgcttggaatgttcttcctcatgaccttttccgaaggttgtttagacaggatttacta
gttgccagtttgttcagaaattttttgcttgccgagaggattatgcgctctgcaaattgt
tctccaatttcttacccaatgttgccaccaacccatcagcaccatatgtgggatgcatgg
gacatggctgctgaaatttgcctttctcagcttccgtcattggttgaggatcctaatgca
gagttccagccaagttcatttttcactgaacagctgatagcctttgaggtatggcttgac
catggatctgagcataaaaagccaccagagcaattgcctattgtgcttcaggttttgctt
agtcaatgtcatcgattccgtgctctagttcttcttggaagattccttgatatgggacca
tgggctgtagatctggccctttctgttggaatatttccttatgttctgaagctgttgcaa
acaaccactccagaactgcgtcaaatccttgtcttcatttggacaaaaattttggcactt
gataagtcatgtcaggttgatcttgtaaaggatggtggtcatgtttatttcattaggttt
cttaatagtgcagaggcatatcctgaacagcgtgcaatggctgcatttgttctggctgtc
attgtggatggtcatagacgtggccaggaagcctgtattgaagcagggttaatccaggtg
tgcttgaagcagcttcatggtttcacgcaaaatgaggcccaaactgaacccttattgctt
cagtggctttgcctttgtcttggaaagctgtgggaggattttactgaggctcagacaata
ggtctgcaggcagatgtgcctgcaatatgtgctcctctacactctgagcctcagccagag
gttagagcttcagcagtttatgcattagctaccttgcttgatgttgggtttgactcgttt
agagatggtattggaggggatgaagaatgtgatgatgttgaaaagaatagagctgagatg
attataattaaaagccttttgaatgttgtttctgatggaagccctcttgtccgcgcagaa
gttgctgtagctctggcacactttgcctttggacataagcagcacctcaagtcaattgct
gctgcatattggaaacctcagcctaattccctgttgaattcattgccttcactggctaat
ataaagggcacaggaagtggaaatatagtttcttctcagattggtcctttaacagccatg
gttcgggatggaagggtatccaccagcagtcctcttgctactgctggaatcatgcatgga
tctccattatccgatgattcatctcaactttctgattctggaatactgaatgatggtgtc
agtaatggggaagttaatcattcaaggccaaaacctttggacaatgcaatgtattcacag
tgtgtactggccatgtttactttagctagggatccatctccacgtgtagcaagtctagga
cggcgggttctttccattattggaattgaacaagtaacaaaatctgtgaagcctgctggt
aatagtgcctggcctagtgatcctgcaaattcctcatcaacccctagtatttctggatta
gctcgttcttcttcctggttggacattaatggaggtcatatggctttaacatttagaact
cctcctgttagccctcctcgacaaaattacttggcaggaattcgtagggtttgctcttta
gacttcaggcctcacctgatgaattctccggactcaggattggctgacccacttctaggc
tctgcttctggatcagagcgcagtttacttcctcagtcaacaatatataattttagttgt
ggccacttctgcaagtctctgcttactgcatcagatgacagtgaagaactattggccaaa
agagaagagcaggagagatttgcactggagcatattgctaagtgccagcactcatctgtt
agcaaacttaacaataatagtcaaattgctagctgggatacaagattcgagacaggtaca
agaactgccttgctgcaacctttctctcctattgtgattgcggcagatgagaatgaacgg
atcagggtatggaattatgaggaagccaccctcctcaatggttttgataatcatgatttt
ccggaaaagggaatatctaaactttgtcttttgaatgagcttgatgacagcttgttgctt
gttgcttcaagtgatggaaatatacggatttggaaagattatacactgagggggaaacaa
aaacacgttaccgcattttcttctatccaaggtcacaaacctggcatgcggagtttgaat
gctgttgtggactggcaacagcagtctggatatctctatgcatctggagagatatcatcc
atcatgctttgggacttggataaggagcaacttgttaattcaataccatcatcctcggat
tgtagtgtctcggcattggcttcttctcaagtccatgctggtcaatttgcagctggtttt
gtggatggttctgttagactatatgacatccggacacccgacatgctggttcgcacaacc
aggccgcatactcaacaagtagcaagagttgtgggtattggctttcaacccggacttgat
caaggaaagattgttagtgcatcccaggctggtgatattcagttcctcgatattagaagt
caaagagatacagaccttacaattgatgctcaccgaggatcacttacagctttagctgtt
catagacatgccccgataatcgccagtggttcagcaaaacagctaatcaaagttttcagt
ctaaaaggtgaacaactcggcaccattagataccaacataccttcatggcccagaagatt
ggttccgtaagttgccttaccttccatccctaccaagtgttactcgctgccggtgccgcc
gatgcctgcgtttcaatctatgctgatgacaactctcatacaagataa
DBGET
integrated database retrieval system
