Gossypium hirsutum (upland cotton): 107903608
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Entry
107903608 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.17
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107903608
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Motif
Pfam:
GH3
GH3_C
GH3_M
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
107903608
NCBI-ProteinID:
XP_040948262
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Position
D05:complement(59126104..59128871)
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AA seq
600 aa
AA seq
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MADLMGTKDYENGLNFLEELTENGHRIQEQVLEEILLRNAGTEYLTRFLHGQTDKQLFKN
NVPIVTYEDIKPYIDRIANGETSNILLADPISEFIQSSGTSGGQPKLIPMTAENFEKKTL
ELTLVDPVVKKYFDGLEKGKTMSLFFVKKGSETPSGLTVRTLTSCYFMSDSFKKSAPKIC
TSPIETILCLDHKQSMYCQLLTGLLQRDHVVSISSIFGSVLARSIKFLEDHWNELCSNIR
TGCLSDWITDPGCRNAVSSILTRPNPELADTIEQICGNESWEGIIKKLWPKAKYINSVIT
GTMSQYISLLDFYGGGIPLVSPSYGSSESTFGINLNPLSNPYDVSYTFLPNMAYFEFLPV
DKDGEEKARESNLDGVSSQWSSEMTNANGNVEPVDSANVKLGQYYEVVVTTFAGLYRYRV
GDVLKLTGFHNNSPQFQFVERRNTVLSIDMDKTSEEDLLKAIGNAKRHLEPLGFVLMTFS
SYAETSSIPGRYVLFWELKFKERNRWLKLDAKIMEECCSIVEESLDFTYKSLREANKIAA
LEVRVVKHGTFDALMDFYVSKGASINQYKTPSCIKSEEAVKVLNSGVLEKFFSPNTFFLS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgatctgatgggaacgaaagattatgaaaatgggttgaattttttggaggaatta
accgaaaatggtcatcgaattcaagaacaagtattagaggagatactgctgagaaatgct
ggaactgaatatctaactcgattcctccatggccaaactgataaacaactcttcaaaaac
aatgtacccattgttacttacgaagatataaagccttacatcgatcgaattgccaatggg
gagacttcaaatatccttttagctgaccccatctccgagttcatccaaagctctggtact
tcaggagggcagccgaagttgatacctatgacagctgaaaattttgagaaaaagacgtta
gaactcaccttggttgatccagtcgtaaaaaaatattttgatggcttggaaaaaggcaaa
acaatgagccttttttttgtcaaaaaagggagtgaaactccatcaggtttaacagtgaga
acgctcacatcgtgctacttcatgagcgatagcttcaagaaaagtgcgcccaaaatctgc
acaagtcctattgagacgattctctgcttggaccacaagcaaagtatgtactgccaattg
cttactggtttgctgcaacgtgatcatgttgtttcaatcagttcgatctttggatccgtt
ttggcaaggagcatcaagttcttagaagatcactggaacgaactgtgttcgaacataaga
actggttgccttagtgattggattactgaccctggttgtaggaacgctgtgtcatcgatc
ctgactaggcctaatccagaattggctgatactattgaacagatatgtggcaatgaatca
tgggaagggattattaagaaactttggcctaaagcaaaatatattaattccgtcattact
ggtaccatgagccaatacatttcattgcttgatttttatggtggtgggatccctttagtt
tcaccaagttatggttcttcggagtctactttcgggatcaatttaaatcctctaagcaac
ccctacgatgtctcttacacctttctcccaaacatggcatactttgagtttctccctgtg
gataaagatggggaagagaaggctcgagaatccaatcttgatggtgtttcaagccaatgg
tcgtcggaaatgacaaatgcaaatggaaatgttgaacctgttgattctgcaaatgtgaaa
ctcggtcaatattatgaggttgtcgtcacaactttcgcgggcctgtatcgataccgagtt
ggggacgttctcaagttaaccggtttccataacaactctccgcagttccagtttgtcgaa
cgacggaatactgttttgagtattgatatggacaaaacaagcgaggaagacctcttgaag
gccatcgggaacgcaaaacgccatcttgaaccacttggtttcgtactgatgacattcagt
agctatgcggagacttcatcgataccaggccggtatgtattgttttgggaactcaagttc
aaagaaaggaatagatggctaaaacttgatgccaagataatggaagaatgctgctccata
gtagaagaatcattggatttcacatataagtcccttagagaggccaataaaattgcagca
ttagaggtaagagtggtaaagcatggaacatttgatgcgcttatggacttttatgtatca
aagggggcttctatcaaccaatacaagacaccttcttgtattaaatctgaggaagctgtg
aaggtattgaattccggggtgctagaaaagtttttcagtcccaatactttctttttaagt
tga
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