Gossypium hirsutum (upland cotton): 107903689
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Entry
107903689 CDS
T04793
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107903689
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107903689
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107903689
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
107903689
NCBI-ProteinID:
XP_016685320
UniProt:
A0A1U8J4Q3
LinkDB
All DBs
Position
D05:48119739..48127345
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AA seq
1181 aa
AA seq
DB search
MNTLSILTLPSLFRQAKHSQFPHFRSISQSLPFPRPTSILSPLSFRLSFKSPRSPFSAEP
QLSDEELEDDEDDDDFEAADEYDEYEDVSGEVSNDVRPSEDEDEDYTENENENEKEISVD
SSNWQIESTWQRVEKLCNLVKELGEEMIDVDALADIYDFRIDKFQRMAIEAFLRGSSVVV
SAPTSSGKTLIAEAAAVATVARRRRLFYTTPLKALSNQKFRQFRETFGDNNVGLLTGDSA
VNKDAQILVLTTEILRNMLYNSVGMASSGSGLFHVDVIVLDEVHYLSDISRGTVWEEIVI
YCPKEVQLISLSATVANPDELAGWIGQIHGKTELVKSSWRPVPLTWHFSTKTSLFPLLND
KGTHMNRKLSLNYLQLSASGVNSYRDDGSRRRNYRDDGSRRRNSRRHGRNGSFDSIVGMS
EQPLSKNDKNMIRRSQVPQVVDTLWQLKAKDMLPAIWFIFNRRGCDAAVQYVEDCSLLDE
CEMSEVELALKKFRLLYPDAVRETAVKGLIRGVAAHHAGCLPLWKSFVEELFQRGLVKVV
FATETLAAGINMPARTAVISSLSKRTSTGRIQLSPNELLQMAGRAGRRGIDERGHVVIVQ
TPYEGAEESCKLLFSGVEPLISQFTASYGMVLNLLGGAKVTRHSNESDETNTLQARRTLE
EARKLVEQSFGNYLGSNVMLAAKEELAKIQKEIEALTYEISDEAIDRKSQKLLTEVAYKE
IADLQEELRAEKRVRTELRRRMELKRFSALKPLLKDFENGHLPFICLQYKDSEGVENFVP
AVYLAEVESLDGSKLKNMVSVDDSFALSSVGTSDTHQDVEPTYYVALGSDNSWYLFTEKW
IKTVYRSGFPNVALTRGEALPREIMRTLLDKEETQWEKLADSELGGLWCIEGSLETWSWS
LNVPVLSSLSENDEVLHMSQAYIESVERYREQRNKVARLKKKIARTEGFREYKKILDRAK
LTEEKIKRLKARSNHLINRMEQIEPSGWKEFLQISKVIHETRALDINTHVIFPLGETAAA
IRGENELWLAMVLRNKILLELKPAQLAAVCASLVSEGIKVRAWKNNNYIYESSSTVLNVI
SLLEEQRNSFVQLQEKHEVEIACCLDGQFSGMVEAWASGLSWRELMMDCAMDEGDLARLL
RRTIDLLAQIPKLPDIDTLLRKNATTASNVMDRPPISELTG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaacactctctcaatcctcacccttccttctcttttccgacaagccaaacactcccaa
ttccctcacttccgctccatttctcaatccctacctttccctcgccccacttccatcctc
tctccgctttcttttcgtctctctttcaaatcccctcgctctcccttctccgctgagccc
caactctctgacgaggaactcgaagatgacgaagacgacgatgattttgaagctgctgat
gaatacgacgaatacgaagacgtttccggtgaagtttccaatgatgtccgaccgagcgaa
gacgaagatgaagactataccgaaaacgaaaacgaaaacgaaaaagaaatctcagtggat
tcatccaactggcagatagaatccacttggcaacgagttgaaaagctttgtaatctagtt
aaggaattgggggaggaaatgattgacgtcgatgcactcgctgatatttacgattttcgc
attgataaatttcagagaatggcgatagaagcatttttaaggggttcgtctgtggtggtt
tcagcgcccaccagcagcggaaagactttaattgcggaagctgctgccgtggcgacggta
gccaggagaaggaggttattctatacaactccgcttaaggcattatccaatcagaagttt
cgacagtttagggagacatttggggataataatgttggccttctcacaggagattctgct
gtcaacaaggatgctcagattttagtcttgactacagagattctgcggaacatgctgtat
aatagtgttggaatggcttcttctgggagtggtctttttcatgttgatgtgattgttctt
gatgaggttcattatttaagtgacatatctcggggtactgtgtgggaggagattgtgatt
tattgccctaaagaagttcaacttataagcctgtcagcgacagttgcaaatccagatgag
ctagctggttggattggtcagattcatggtaaaacagagctggtaaaatcatcatggcgt
cccgttccattgacttggcacttctcaacaaagacctctttatttccgcttcttaatgac
aagggaacacacatgaataggaagttgtcactcaattatttacaactttctgcttcagga
gttaactcgtacagggatgatggatctagaagaaggaattacagggatgatggatctaga
agaaggaattcacgaagacatggaagaaacggtagctttgatagtatagttggcatgtct
gagcagcctctttcaaagaatgacaaaaacatgattcgccgttcacaggttcctcaagtt
gttgatacactatggcaactcaaagcaaaggacatgcttccagcaatttggtttattttt
aataggagaggctgtgacgcagctgtgcagtatgttgaagattgtagccttttggatgag
tgtgagatgagtgaggtagaacttgcattgaagaagtttcggcttctgtatcctgatgct
gtgagggagactgcagtgaaaggactaattagaggggtggctgcacatcatgctggttgt
cttccactatggaaatcatttgttgaggagctctttcagcgaggacttgttaaggttgtt
tttgctacagaaaccctggcggctggaattaatatgcctgctaggactgctgttatttca
tctcttagcaaaaggacaagcactggacgtatccaattaagccctaatgaactgcttcaa
atggcagggcgtgctggacgtagaggcatagatgaaaggggccatgttgtgatagtgcag
actccttatgaaggtgctgaagagagctgcaagcttctattttctggagttgaacccctc
atatcacagttcactgcttcatatggaatggtgttgaatcttctaggaggtgcaaaagtt
actcgtcactccaatgaatcggatgaaacaaacacattacaagcaaggagaactttggaa
gaggcaaggaaattagttgaacaaagttttggaaattacttaggcagcaatgtgatgctt
gctgcaaaagaggagcttgctaaaatacagaaagagatagaagcattgacttacgaaatt
agtgatgaggctatagatagaaagagccagaaacttctaacggaggtggcatataaggag
attgcagatttacaagaggaattaagggcagaaaaacgtgtcaggactgaacttcgaaga
aggatggagttgaagagattttctgctctgaaacctctcctaaaggattttgaaaatgga
cacctacccttcatttgcttgcagtataaggattctgaaggagttgaaaacttcgttcct
gctgtttatctagcagaggttgaatcgcttgatgggtcaaaacttaagaacatggtttcg
gttgatgattcttttgcactgagcagtgttggaacatctgacactcatcaagatgttgaa
ccaacttattatgtggcccttggttcagataactcctggtatctatttacagaaaagtgg
attaaaactgtttatagaagtggctttcccaatgttgctttaactcggggggaagctttg
ccccgggaaataatgaggacacttctcgataaagaggaaacacaatgggaaaaacttgct
gattctgagcttggtggtctatggtgcattgaaggatctctggagacatggtcttggagt
ctaaatgtgccagttttaagtagtctttccgaaaatgatgaggtgttacatatgtcacaa
gcatacattgaatcagtggaacgttacagagaacaaaggaacaaagttgcacgtttgaag
aaaaagatagcccgtactgagggcttccgagaatataaaaagatcttggacagggctaag
cttacagaggaaaagataaaacggttgaaggctagatcaaatcatttgatcaatagaatg
gagcaaattgaaccttctggttggaaggagtttctacaaatcagcaaagtcattcatgaa
acaagggcattagacatcaatacacatgtaatatttcccctgggtgaaacagcagctgca
attcgaggagaaaatgaactgtggttggcaatggtacttcgaaacaaaatcttgctagag
ttaaagcctgcgcaactcgctgctgtgtgtgcgagtttagtgtccgaggggatcaaggta
cgcgcatggaaaaacaataattacatatacgaatcttcgtctactgtcctaaatgtgatt
agtttactagaagaacaaaggaactcgtttgtccaacttcaagagaaacatgaggtagag
atagcttgttgtttagatggccagttttcaggaatggtggaagcctgggcgtctgggtta
tcatggagggaattgatgatggattgtgcaatggatgagggtgatttagctcgactatta
cgaagaacgattgaccttttggctcagatacctaaattgcctgatatcgatactttgctg
cggaaaaatgccacaactgcatccaatgtcatggatcgtccacccataagcgagctcact
ggatga
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