KEGG   Gossypium hirsutum (upland cotton): 107903715
Entry
107903715         CDS       T04793                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107903715
Enzymes [BR:ghi01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     107903715
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    107903715
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 107903715
NCBI-ProteinID: XP_040942074
UniProt: A0ABM2ZHE4
LinkDB
Position
A13:complement(43536650..43541123)
AA seq 726 aa
MDDCPKDICAVTDSSTEGVPASQPPLDPNGTTQRSPEELVARAIAPVKREFLRPPPSSRT
TQNNPASDTNVKQPQANVVQEKKSKRQLKRERRQEQNSPLNLCPEIAKTGDVNACSYKDK
CRFSHDIEAFMAQKPADLEGDCPFIKADAPCPYGLACRFAGTHKDNAPIATSNLLKKSSE
VNGLSKDVQKLLWKNKMRFTKADAVVKSLGLAGPNWKVKKLVDKEEDEVGLDGSHAADET
NCKKVLDDSVDCSECPSTFPAAVNAEEACETDELRPLKKAKLLVDEKCSDEGEDATVLEN
DNEKNSAETELADNVLAEPDRSPKICNLKDATVLEKYNEKKSAETELADDVHAEPDKSLK
IHPREKMLIDFREKLYLAPLTTVGNLPFRRVCKTLGADVTCGEMAMCTNLLQGQASEWAL
LRRHSSEDLFGVQICGAYPDTVARTVELIEKECTVDFIDINMGCPIDIVVDKGAGSFLLT
KPLRMKGIIQAASGTVDKPITVKVRTGYFGGKNRIDSLIADIGSWGATAVTIHGRSRQQR
YSKLADWDYIYQCARKAPSTLQVLGNGDIFSYLDWNNRKTDSPELSTCMIARGALIKPWL
FTEIKEQRHWDISSQERLNILKEYVRFGLEHWGSDKKGVETTRHFVLEWLSYACRYIPVG
LLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAY
DRAENG
NT seq 2181 nt   +upstreamnt  +downstreamnt
atggatgactgtccgaaagatatctgtgcggttacagactcttcgacggaaggggtcccg
gcttcacagccgcctttggacccgaatggaactactcaacgttcaccggaagagttagta
gctcgagccattgcacctgtaaagcgagagtttcttcgacctccaccatcctctagaacc
acccaaaacaaccccgcctctgacaccaacgtcaagcaacctcaggcaaacgttgtccag
gaaaagaaatcgaagcggcaactcaaacgagagcgtcgtcaggagcaaaattctcctttg
aatctatgtcctgagatagcaaagacgggagatgtcaatgcatgttcttataaagataaa
tgtcgtttcagccatgacattgaagcctttatggctcagaaaccggctgatctagagggt
gactgcccatttataaaagctgatgcaccctgcccttatggtttagcctgtagatttgca
ggcacgcataaggataatgctcccattgctacttctaatttattgaagaaaagctctgaa
gtcaatggactaagcaaagatgttcagaagcttttgtggaaaaacaaaatgcgctttact
aaagcggatgctgtagttaaatctcttggactggcggggcccaactggaaagtaaagaag
ctggtagataaggaggaagacgaagttggtttagatggttctcatgctgctgatgagacc
aattgcaaaaaggtgcttgatgattcagttgactgttctgagtgtccttcaacatttcca
gcagcagttaatgctgaggaggcatgtgaaactgatgagttgagacccttgaagaaggcc
aagttactggttgatgaaaagtgctctgatgaaggggaagatgcaactgttttggagaat
gataatgaaaaaaattctgctgaaactgaactggcagataatgtacttgcagaacctgat
aggagccccaagatatgtaatttgaaagatgcgactgttcttgagaagtataatgaaaaa
aaatctgctgaaactgaactggctgatgatgtacatgcagaacctgataagagcctcaag
atacaccctcgtgaaaagatgcttattgattttagagagaagttgtatcttgctcctcta
accacagttgggaatcttccttttcgtagggtttgcaaaacactgggagcagatgtgaca
tgcggtgaaatggcaatgtgcaccaaccttttgcagggtcaagcttcagaatgggctctg
ctgaggcgacattcatccgaggatttgtttggagtccagatatgtggggcatatcctgac
actgtagcacgtactgttgaacttatagaaaaggagtgtacggtggacttcattgacatt
aatatggggtgtccaattgatattgttgttgataagggtgctggatcttttcttctcaca
aaaccattacgtatgaaaggaatcattcaagcagcttctggcactgtagataagcctata
actgttaaggtgagaacgggttattttggaggtaaaaaccgcattgattcgctaattgca
gatattggcagttggggtgctactgcagtgacaatacatggtcgatcacgtcagcaacgc
tacagtaaacttgctgattgggattatatataccagtgtgctcggaaggcccctagcaca
ttacaagttttgggtaatggagatattttctcatatttagattggaacaatcgtaaaact
gacagccctgagctttctacgtgtatgattgctcgaggggcattgattaagccttggtta
tttactgaaatcaaggaacagaggcactgggatatcagttctcaggagcggttgaatatt
ctgaaggagtatgtacgttttggcctagagcattggggatctgacaaaaagggtgtggaa
acaactaggcattttgtgttggaatggcttagctacgcatgtaggtatattcctgttggt
cttttagatgtcatcccccaacgtctgaattggcgacctccttcatactatggacgagat
gatcttgagacgctaatggcttctgattctgcagctgactggatccgtatatctgaaatg
ctgcttggcaaggttccagatggtttcacattcgcaccaaagcacaaatccaatgcttat
gatcgtgcagaaaatggctaa

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