KEGG   Gossypium hirsutum (upland cotton): 107903900
Entry
107903900         CDS       T04793                                 
Name
(RefSeq) DNA polymerase alpha subunit B-like
  KO
K02321  DNA polymerase alpha subunit B
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107903900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ghi03032]
    107903900
DNA replication proteins [BR:ghi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    107903900
SSDB
Motif
Pfam: DNA_pol_E_B OB_DPOA2 Pol_alpha_B_N PfEMP1_CIDRalpha1_dom
Other DBs
NCBI-GeneID: 107903900
NCBI-ProteinID: XP_016685588
UniProt: A0A1U8JA97
LinkDB
Position
D05:complement(38386421..38392960)
AA seq 623 aa
MEEEIKAEFLKSGFTLDEEQEILKKCHTFCQDYGLEPSDLVSSWEIYYLNRQLDESVVKD
AEMDGFLGHLQSEQLGASAKKDPGLHMYSFKDVDMVLDAEDEDAKDVILGTPIDKSEKLQ
LDIYDSAHKTNGNIYSSERKSKLVTPFGKRSNKFVVKFNIDNLPTIETANGIEEHYDLED
GIIKRVQPLKSSSLVVHRSGLEPGCRFMYDTIEDRFNAIENRIRKHAAALVASSLYEEPM
DPSVASQRSMFAVGMICCDGEGHLNDKSILLQSSVEHSRGQLVRLELNKLSYFSVFPGQV
VGIKGNNPSGHCLIASELVDSVPLSIAADADLPPTKKQALDGEIQATHLSSTPTETTMII
AAGPFTTTDNLLFEPLSELLAYATRNSPQLLILLGPFIDSEHPQIKKGTVDLSFDDIFQS
EVLRMVQDYLEYMGPNARLVMVPSIRDANHDFVFPQPAFDLDSLNVRLQITSLNNPGIFE
ADQFMIGCCTVDILKHLSGEEMSRHSMDGQPNDRLSRLANHILSQQSFYPLYPPAEGVPM
DFSLASEALHISSVPDLLILPSDIKYFVKVLPVGGTTEGEEEQMKRCVCINPGRLAKGEG
GGTFVELKYQGSSDKMNASIISI
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggaagaggagatcaaagcagagttcttgaagagcgggtttactcttgacgaagaacaa
gagattcttaaaaaatgtcatacattttgtcaagattacggtctcgagccttccgatctg
gtttcaagctgggagatttattatctcaatcgacaacttgatgaatctgttgtgaaggat
gcagagatggatgggtttttagggcacctgcagagtgaacaattaggtgcgagtgctaaa
aaggatcctggtttgcatatgtactcttttaaagacgttgacatggttcttgatgctgaa
gatgaagatgcaaaagatgttattcttggaactccaatagacaaatcagagaaacttcag
ttggacatatatgactcggctcataaaacaaatgggaacatttattcttctgagagaaaa
tcaaaactagtgacaccatttgggaaacgaagtaacaaatttgtggtcaaattcaacatt
gataatcttcctactatagagactgccaatggcattgaagaacattatgatcttgaggat
ggaattattaaaagggttcaacctctaaaaagctcttcattggtggtccaccgatcaggg
ctagaaccaggttgcaggttcatgtatgacacgattgaagacaggttcaatgcaattgaa
aaccgcatcagaaagcatgcagctgcacttgttgcatctagtctctacgaagaaccaatg
gatccatcagttgcttcgcagaggagcatgtttgccgttgggatgatctgctgtgatgga
gaaggtcatctaaatgataaatctatcttgttgcaaagcagtgttgagcattcgagaggg
caacttgttcgtctagagttaaataaactgagttacttttctgtttttccaggccaggtt
gtaggcatcaagggtaacaatcctagtggccattgtttgattgcatcagagctagtagat
tctgttcctttatccattgctgctgacgcagatttgcctcctacaaagaagcaagcttta
gatggggagattcaggcaactcatctttcctccacgccaacagagaccacaatgattatt
gctgctggtccattcactactacagacaacttattatttgaacctctttcggaactgctt
gcctacgcaaccagaaactctccacagttgcttatactgttaggaccttttatcgattct
gaacatccacagatcaagaaaggaactgttgacttgagtttcgatgatatattccaatca
gaagttcttagaatggttcaagattatttggaatatatgggacccaatgctcggttggtt
atggttccttccatacgagatgctaatcatgattttgttttccctcagcctgctttcgat
ctcgattctctcaatgttaggcttcagataaccagtctcaataatccagggatttttgag
gcagatcagttcatgataggttgctgcacggtagatattctcaaacatcttagtggggag
gagatgtcaagacattcaatggatggacaacctaatgatcggttgagtagacttgccaac
catattcttagccaacagagcttttatccactgtatccaccagctgaaggtgtcccaatg
gatttttcccttgcttctgaagctcttcatatatcttccgttccagatcttcttatctta
ccttcagacatcaagtactttgtcaaggtgttacctgtaggggggacaaccgaaggggaa
gaagaacaaatgaaaagatgtgtttgtattaacccgggaagactggctaagggagaaggt
ggcggcacgtttgtagagctaaaatatcaggggagttctgataagatgaatgcttcaatt
atcagcatatga

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